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CCDC125 (coiled-coil domain containing 125)

Identity

Alias_symbol (synonym)KENAE
Other alias
HGNC (Hugo) CCDC125
LocusID (NCBI) 202243
Atlas_Id 61477
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 69280692 and ends at 69332793 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC125   28924
Cards
Entrez_Gene (NCBI)CCDC125  202243  coiled-coil domain containing 125
AliasesKENAE
GeneCards (Weizmann)CCDC125
Ensembl hg19 (Hinxton)ENSG00000183323 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183323 [Gene_View]  chr5:69280692-69332793 [Contig_View]  CCDC125 [Vega]
ICGC DataPortalENSG00000183323
TCGA cBioPortalCCDC125
AceView (NCBI)CCDC125
Genatlas (Paris)CCDC125
WikiGenes202243
SOURCE (Princeton)CCDC125
Genetics Home Reference (NIH)CCDC125
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC125  -     chr5:69280692-69332793 -  5q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC125  -     5q13.2   [Description]    (hg19-Feb_2009)
EnsemblCCDC125 - 5q13.2 [CytoView hg19]  CCDC125 - 5q13.2 [CytoView hg38]
Mapping of homologs : NCBICCDC125 [Mapview hg19]  CCDC125 [Mapview hg38]
OMIM613781   
Gene and transcription
Genbank (Entrez)AB024691 AB024692 AI141520 AK299871 AL832658
RefSeq transcript (Entrez)NM_001297696 NM_001297697 NM_176816
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC125
Cluster EST : UnigeneHs.654850 [ NCBI ]
CGAP (NCI)Hs.654850
Alternative Splicing GalleryENSG00000183323
Gene ExpressionCCDC125 [ NCBI-GEO ]   CCDC125 [ EBI - ARRAY_EXPRESS ]   CCDC125 [ SEEK ]   CCDC125 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC125 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)202243
GTEX Portal (Tissue expression)CCDC125
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86Z20   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86Z20  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86Z20
Splice isoforms : SwissVarQ86Z20
PhosPhoSitePlusQ86Z20
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC125
DMDM Disease mutations202243
Blocks (Seattle)CCDC125
SuperfamilyQ86Z20
Human Protein AtlasENSG00000183323
Peptide AtlasQ86Z20
HPRD13774
IPIIPI00329436   IPI00848026   IPI00737712   IPI00853578   
Protein Interaction databases
DIP (DOE-UCLA)Q86Z20
IntAct (EBI)Q86Z20
FunCoupENSG00000183323
BioGRIDCCDC125
STRING (EMBL)CCDC125
ZODIACCCDC125
Ontologies - Pathways
QuickGOQ86Z20
Ontology : AmiGOcytoplasm  regulation of cell motility  
Ontology : EGO-EBIcytoplasm  regulation of cell motility  
NDEx NetworkCCDC125
Atlas of Cancer Signalling NetworkCCDC125
Wikipedia pathwaysCCDC125
Orthology - Evolution
OrthoDB202243
GeneTree (enSembl)ENSG00000183323
Phylogenetic Trees/Animal Genes : TreeFamCCDC125
HOVERGENQ86Z20
HOGENOMQ86Z20
Homologs : HomoloGeneCCDC125
Homology/Alignments : Family Browser (UCSC)CCDC125
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC125 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC125
dbVarCCDC125
ClinVarCCDC125
1000_GenomesCCDC125 
Exome Variant ServerCCDC125
ExAC (Exome Aggregation Consortium)CCDC125 (select the gene name)
Genetic variants : HAPMAP202243
Genomic Variants (DGV)CCDC125 [DGVbeta]
DECIPHERCCDC125 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC125 
Mutations
ICGC Data PortalCCDC125 
TCGA Data PortalCCDC125 
Broad Tumor PortalCCDC125
OASIS PortalCCDC125 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCDC125  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCDC125
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCDC125
DgiDB (Drug Gene Interaction Database)CCDC125
DoCM (Curated mutations)CCDC125 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC125 (select a term)
intoGenCCDC125
Cancer3DCCDC125(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613781   
Orphanet
MedgenCCDC125
Genetic Testing Registry CCDC125
NextProtQ86Z20 [Medical]
TSGene202243
GENETestsCCDC125
Target ValidationCCDC125
Huge Navigator CCDC125 [HugePedia]
snp3D : Map Gene to Disease202243
BioCentury BCIQCCDC125
ClinGenCCDC125
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD202243
Chemical/Pharm GKB GenePA147358306
Clinical trialCCDC125
Miscellaneous
canSAR (ICR)CCDC125 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC125
EVEXCCDC125
GoPubMedCCDC125
iHOPCCDC125
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:04:02 CEST 2017

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