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CCDC126 (coiled-coil domain containing 126)

Identity

Alias_symbol (synonym)FLJ23031
Other alias-
HGNC (Hugo) CCDC126
LocusID (NCBI) 90693
Atlas_Id 61478
Location 7p15.3  [Link to chromosome band 7p15]
Location_base_pair Starts at 23597379 and ends at 23644708 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CCDC126 (7p15.3) / OSBPL3 (7p15.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC126   22398
Cards
Entrez_Gene (NCBI)CCDC126  90693  coiled-coil domain containing 126
Aliases
GeneCards (Weizmann)CCDC126
Ensembl hg19 (Hinxton)ENSG00000169193 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000169193 [Gene_View]  chr7:23597379-23644708 [Contig_View]  CCDC126 [Vega]
ICGC DataPortalENSG00000169193
TCGA cBioPortalCCDC126
AceView (NCBI)CCDC126
Genatlas (Paris)CCDC126
WikiGenes90693
SOURCE (Princeton)CCDC126
Genetics Home Reference (NIH)CCDC126
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC126  -     chr7:23597379-23644708 +  7p15.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC126  -     7p15.3   [Description]    (hg19-Feb_2009)
EnsemblCCDC126 - 7p15.3 [CytoView hg19]  CCDC126 - 7p15.3 [CytoView hg38]
Mapping of homologs : NCBICCDC126 [Mapview hg19]  CCDC126 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026684 AK289911 AL598772 AY358713 BC012427
RefSeq transcript (Entrez)NM_138771
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC126
Cluster EST : UnigeneHs.232296 [ NCBI ]
CGAP (NCI)Hs.232296
Alternative Splicing GalleryENSG00000169193
Gene ExpressionCCDC126 [ NCBI-GEO ]   CCDC126 [ EBI - ARRAY_EXPRESS ]   CCDC126 [ SEEK ]   CCDC126 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC126 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90693
GTEX Portal (Tissue expression)CCDC126
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96EE4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96EE4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96EE4
Splice isoforms : SwissVarQ96EE4
PhosPhoSitePlusQ96EE4
Domains : Interpro (EBI)DUF4525    GlyclTrfase_18   
Domain families : Pfam (Sanger)DUF4525 (PF15027)   
Domain families : Pfam (NCBI)pfam15027   
Conserved Domain (NCBI)CCDC126
DMDM Disease mutations90693
Blocks (Seattle)CCDC126
SuperfamilyQ96EE4
Human Protein AtlasENSG00000169193
Peptide AtlasQ96EE4
HPRD14278
IPIIPI00658073   IPI00917602   
Protein Interaction databases
DIP (DOE-UCLA)Q96EE4
IntAct (EBI)Q96EE4
FunCoupENSG00000169193
BioGRIDCCDC126
STRING (EMBL)CCDC126
ZODIACCCDC126
Ontologies - Pathways
QuickGOQ96EE4
Ontology : AmiGOextracellular region  Golgi apparatus  protein N-linked glycosylation  membrane  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity  
Ontology : EGO-EBIextracellular region  Golgi apparatus  protein N-linked glycosylation  membrane  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity  
NDEx NetworkCCDC126
Atlas of Cancer Signalling NetworkCCDC126
Wikipedia pathwaysCCDC126
Orthology - Evolution
OrthoDB90693
GeneTree (enSembl)ENSG00000169193
Phylogenetic Trees/Animal Genes : TreeFamCCDC126
HOVERGENQ96EE4
HOGENOMQ96EE4
Homologs : HomoloGeneCCDC126
Homology/Alignments : Family Browser (UCSC)CCDC126
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC126 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC126
dbVarCCDC126
ClinVarCCDC126
1000_GenomesCCDC126 
Exome Variant ServerCCDC126
ExAC (Exome Aggregation Consortium)CCDC126 (select the gene name)
Genetic variants : HAPMAP90693
Genomic Variants (DGV)CCDC126 [DGVbeta]
DECIPHERCCDC126 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC126 
Mutations
ICGC Data PortalCCDC126 
TCGA Data PortalCCDC126 
Broad Tumor PortalCCDC126
OASIS PortalCCDC126 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCDC126  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCDC126
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCDC126
DgiDB (Drug Gene Interaction Database)CCDC126
DoCM (Curated mutations)CCDC126 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC126 (select a term)
intoGenCCDC126
Cancer3DCCDC126(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCCDC126
Genetic Testing Registry CCDC126
NextProtQ96EE4 [Medical]
TSGene90693
GENETestsCCDC126
Target ValidationCCDC126
Huge Navigator CCDC126 [HugePedia]
snp3D : Map Gene to Disease90693
BioCentury BCIQCCDC126
ClinGenCCDC126
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90693
Chemical/Pharm GKB GenePA162381284
Clinical trialCCDC126
Miscellaneous
canSAR (ICR)CCDC126 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC126
EVEXCCDC126
GoPubMedCCDC126
iHOPCCDC126
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:04:02 CEST 2017

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