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CCDC13-AS1 (CCDC13 antisense RNA 1)

Identity

Alias_namesCCDC13 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) CCDC13-AS1
LocusID (NCBI) 100874114
Atlas_Id 61484
Location 3p22.1  [Link to chromosome band 3p22]
Location_base_pair Starts at 42732575 and ends at 42745158 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC13-AS1   41142
Cards
Entrez_Gene (NCBI)CCDC13-AS1  100874114  CCDC13 antisense RNA 1
Aliases
GeneCards (Weizmann)CCDC13-AS1
Ensembl hg19 (Hinxton)ENSG00000173811 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000173811 [Gene_View]  chr3:42732575-42745158 [Contig_View]  CCDC13-AS1 [Vega]
ICGC DataPortalENSG00000173811
TCGA cBioPortalCCDC13-AS1
AceView (NCBI)CCDC13-AS1
Genatlas (Paris)CCDC13-AS1
WikiGenes100874114
SOURCE (Princeton)CCDC13-AS1
Genetics Home Reference (NIH)CCDC13-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC13-AS1  -     chr3:42732575-42745158 +  3p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC13-AS1  -     3p22.1   [Description]    (hg19-Feb_2009)
EnsemblCCDC13-AS1 - 3p22.1 [CytoView hg19]  CCDC13-AS1 - 3p22.1 [CytoView hg38]
Mapping of homologs : NCBICCDC13-AS1 [Mapview hg19]  CCDC13-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI619493 AK098828 BX111635 DB179860
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC13-AS1
Cluster EST : UnigeneHs.669654 [ NCBI ]
CGAP (NCI)Hs.669654
Alternative Splicing GalleryENSG00000173811
Gene ExpressionCCDC13-AS1 [ NCBI-GEO ]   CCDC13-AS1 [ EBI - ARRAY_EXPRESS ]   CCDC13-AS1 [ SEEK ]   CCDC13-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC13-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874114
GTEX Portal (Tissue expression)CCDC13-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC13-AS1
DMDM Disease mutations100874114
Blocks (Seattle)CCDC13-AS1
Human Protein AtlasENSG00000173811
Protein Interaction databases
FunCoupENSG00000173811
BioGRIDCCDC13-AS1
STRING (EMBL)CCDC13-AS1
ZODIACCCDC13-AS1
Ontologies - Pathways
Huge Navigator CCDC13-AS1 [HugePedia]
snp3D : Map Gene to Disease100874114
BioCentury BCIQCCDC13-AS1
ClinGenCCDC13-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874114
Clinical trialCCDC13-AS1
Miscellaneous
canSAR (ICR)CCDC13-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC13-AS1
EVEXCCDC13-AS1
GoPubMedCCDC13-AS1
iHOPCCDC13-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:04:03 CEST 2017

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