Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CCDC132 (coiled-coil domain containing 132)

Identity

Other alias-
HGNC (Hugo) CCDC132
LocusID (NCBI) 55610
Atlas_Id 61481
Location 7q21.3  [Link to chromosome band 7q21]
Location_base_pair Starts at 92861653 and ends at 92990435 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CDH1 CCDC132PRKAG2 CCDC132

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC132   25956
Cards
Entrez_Gene (NCBI)CCDC132  55610  coiled-coil domain containing 132
Aliases
GeneCards (Weizmann)CCDC132
Ensembl hg19 (Hinxton)ENSG00000004766 [Gene_View]  chr7:92861653-92990435 [Contig_View]  CCDC132 [Vega]
Ensembl hg38 (Hinxton)ENSG00000004766 [Gene_View]  chr7:92861653-92990435 [Contig_View]  CCDC132 [Vega]
ICGC DataPortalENSG00000004766
TCGA cBioPortalCCDC132
AceView (NCBI)CCDC132
Genatlas (Paris)CCDC132
WikiGenes55610
SOURCE (Princeton)CCDC132
Genetics Home Reference (NIH)CCDC132
Genomic and cartography
GoldenPath hg19 (UCSC)CCDC132  -     chr7:92861653-92990435 +  7q21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CCDC132  -     7q21.3   [Description]    (hg38-Dec_2013)
EnsemblCCDC132 - 7q21.3 [CytoView hg19]  CCDC132 - 7q21.3 [CytoView hg38]
Mapping of homologs : NCBICCDC132 [Mapview hg19]  CCDC132 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA724937 AB058764 AB100163 AK000104 AK027234
RefSeq transcript (Entrez)NM_001257998 NM_017667 NM_024553
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)CCDC132
Cluster EST : UnigeneHs.202424 [ NCBI ]
CGAP (NCI)Hs.202424
Alternative Splicing GalleryENSG00000004766
Gene ExpressionCCDC132 [ NCBI-GEO ]   CCDC132 [ EBI - ARRAY_EXPRESS ]   CCDC132 [ SEEK ]   CCDC132 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC132 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55610
GTEX Portal (Tissue expression)CCDC132
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96JG6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96JG6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96JG6
Splice isoforms : SwissVarQ96JG6
PhosPhoSitePlusQ96JG6
Domains : Interpro (EBI)DUF2451_C    Vacuolar_sorting-assoc_54   
Domain families : Pfam (Sanger)DUF2450 (PF10475)    DUF2451 (PF10474)   
Domain families : Pfam (NCBI)pfam10475    pfam10474   
Conserved Domain (NCBI)CCDC132
DMDM Disease mutations55610
Blocks (Seattle)CCDC132
SuperfamilyQ96JG6
Human Protein AtlasENSG00000004766
Peptide AtlasQ96JG6
IPIIPI00553067   IPI00103148   IPI01014743   IPI00925392   IPI01015172   IPI00418185   IPI00924827   IPI00925264   IPI00925633   
Protein Interaction databases
DIP (DOE-UCLA)Q96JG6
IntAct (EBI)Q96JG6
FunCoupENSG00000004766
BioGRIDCCDC132
STRING (EMBL)CCDC132
ZODIACCCDC132
Ontologies - Pathways
QuickGOQ96JG6
Ontology : AmiGOmembrane  endocytic recycling  retrograde transport, endosome to Golgi  recycling endosome  extracellular exosome  EARP complex  
Ontology : EGO-EBImembrane  endocytic recycling  retrograde transport, endosome to Golgi  recycling endosome  extracellular exosome  EARP complex  
NDEx NetworkCCDC132
Atlas of Cancer Signalling NetworkCCDC132
Wikipedia pathwaysCCDC132
Orthology - Evolution
OrthoDB55610
GeneTree (enSembl)ENSG00000004766
Phylogenetic Trees/Animal Genes : TreeFamCCDC132
HOVERGENQ96JG6
HOGENOMQ96JG6
Homologs : HomoloGeneCCDC132
Homology/Alignments : Family Browser (UCSC)CCDC132
Gene fusions - Rearrangements
Fusion: TCGACDH1 CCDC132
Fusion: TCGAPRKAG2 CCDC132
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC132 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC132
dbVarCCDC132
ClinVarCCDC132
1000_GenomesCCDC132 
Exome Variant ServerCCDC132
ExAC (Exome Aggregation Consortium)CCDC132 (select the gene name)
Genetic variants : HAPMAP55610
Genomic Variants (DGV)CCDC132 [DGVbeta]
DECIPHER (Syndromes)7:92861653-92990435  ENSG00000004766
CONAN: Copy Number AnalysisCCDC132 
Mutations
ICGC Data PortalCCDC132 
TCGA Data PortalCCDC132 
Broad Tumor PortalCCDC132
OASIS PortalCCDC132 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCDC132  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCDC132
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCDC132
DgiDB (Drug Gene Interaction Database)CCDC132
DoCM (Curated mutations)CCDC132 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC132 (select a term)
intoGenCCDC132
Cancer3DCCDC132(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCCDC132
Genetic Testing Registry CCDC132
NextProtQ96JG6 [Medical]
TSGene55610
GENETestsCCDC132
Huge Navigator CCDC132 [HugePedia]
snp3D : Map Gene to Disease55610
BioCentury BCIQCCDC132
ClinGenCCDC132
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55610
Chemical/Pharm GKB GenePA162381332
Clinical trialCCDC132
Miscellaneous
canSAR (ICR)CCDC132 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC132
EVEXCCDC132
GoPubMedCCDC132
iHOPCCDC132
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:58:21 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.