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CCDC14 (coiled-coil domain containing 14)

Identity

Alias_symbol (synonym)FLJ12892
DKFZp434L1050
Other alias-
HGNC (Hugo) CCDC14
LocusID (NCBI) 64770
Atlas_Id 61485
Location 3q21.1  [Link to chromosome band 3q21]
Location_base_pair Starts at 123632274 and ends at 123680255 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CCDC14 (3q21.1) / ADAM19 (5q33.3)CCDC14 (3q21.1) / CCDC14 (3q21.1)CCDC14 (3q21.1) / PCM1 (8p22)
CCDC14 (3q21.1) / SDCCAG8 (1q43)DICER1 (14q32.13) / CCDC14 (3q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC14   25766
Cards
Entrez_Gene (NCBI)CCDC14  64770  coiled-coil domain containing 14
Aliases
GeneCards (Weizmann)CCDC14
Ensembl hg19 (Hinxton)ENSG00000175455 [Gene_View]  chr3:123632274-123680255 [Contig_View]  CCDC14 [Vega]
Ensembl hg38 (Hinxton)ENSG00000175455 [Gene_View]  chr3:123632274-123680255 [Contig_View]  CCDC14 [Vega]
ICGC DataPortalENSG00000175455
TCGA cBioPortalCCDC14
AceView (NCBI)CCDC14
Genatlas (Paris)CCDC14
WikiGenes64770
SOURCE (Princeton)CCDC14
Genetics Home Reference (NIH)CCDC14
Genomic and cartography
GoldenPath hg19 (UCSC)CCDC14  -     chr3:123632274-123680255 -  3q21.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CCDC14  -     3q21.1   [Description]    (hg38-Dec_2013)
EnsemblCCDC14 - 3q21.1 [CytoView hg19]  CCDC14 - 3q21.1 [CytoView hg38]
Mapping of homologs : NCBICCDC14 [Mapview hg19]  CCDC14 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA743688 AF086562 AI435151 AK022954 AK027607
RefSeq transcript (Entrez)NM_001308317 NM_022757
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)CCDC14
Cluster EST : UnigeneHs.645028 [ NCBI ]
CGAP (NCI)Hs.645028
Alternative Splicing GalleryENSG00000175455
Gene ExpressionCCDC14 [ NCBI-GEO ]   CCDC14 [ EBI - ARRAY_EXPRESS ]   CCDC14 [ SEEK ]   CCDC14 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64770
GTEX Portal (Tissue expression)CCDC14
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ49A88   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ49A88  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ49A88
Splice isoforms : SwissVarQ49A88
PhosPhoSitePlusQ49A88
Domains : Interpro (EBI)CCDC14   
Domain families : Pfam (Sanger)CCDC14 (PF15254)   
Domain families : Pfam (NCBI)pfam15254   
Conserved Domain (NCBI)CCDC14
DMDM Disease mutations64770
Blocks (Seattle)CCDC14
SuperfamilyQ49A88
Human Protein AtlasENSG00000175455
Peptide AtlasQ49A88
HPRD07801
IPIIPI00917626   IPI00892917   IPI00894066   IPI00791936   IPI00783450   IPI00396060   IPI00973024   IPI00915942   IPI00973155   IPI00915813   IPI00917296   IPI00947130   
Protein Interaction databases
DIP (DOE-UCLA)Q49A88
IntAct (EBI)Q49A88
FunCoupENSG00000175455
BioGRIDCCDC14
STRING (EMBL)CCDC14
ZODIACCCDC14
Ontologies - Pathways
QuickGOQ49A88
Ontology : AmiGOprotein binding  centrosome  substantia nigra development  
Ontology : EGO-EBIprotein binding  centrosome  substantia nigra development  
NDEx NetworkCCDC14
Atlas of Cancer Signalling NetworkCCDC14
Wikipedia pathwaysCCDC14
Orthology - Evolution
OrthoDB64770
GeneTree (enSembl)ENSG00000175455
Phylogenetic Trees/Animal Genes : TreeFamCCDC14
HOVERGENQ49A88
HOGENOMQ49A88
Homologs : HomoloGeneCCDC14
Homology/Alignments : Family Browser (UCSC)CCDC14
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC14
dbVarCCDC14
ClinVarCCDC14
1000_GenomesCCDC14 
Exome Variant ServerCCDC14
ExAC (Exome Aggregation Consortium)CCDC14 (select the gene name)
Genetic variants : HAPMAP64770
Genomic Variants (DGV)CCDC14 [DGVbeta]
DECIPHER (Syndromes)3:123632274-123680255  ENSG00000175455
CONAN: Copy Number AnalysisCCDC14 
Mutations
ICGC Data PortalCCDC14 
TCGA Data PortalCCDC14 
Broad Tumor PortalCCDC14
OASIS PortalCCDC14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCDC14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCDC14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCDC14
DgiDB (Drug Gene Interaction Database)CCDC14
DoCM (Curated mutations)CCDC14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC14 (select a term)
intoGenCCDC14
Cancer3DCCDC14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCCDC14
Genetic Testing Registry CCDC14
NextProtQ49A88 [Medical]
TSGene64770
GENETestsCCDC14
Huge Navigator CCDC14 [HugePedia]
snp3D : Map Gene to Disease64770
BioCentury BCIQCCDC14
ClinGenCCDC14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64770
Chemical/Pharm GKB GenePA134990564
Clinical trialCCDC14
Miscellaneous
canSAR (ICR)CCDC14 (select the gene name)
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC14
EVEXCCDC14
GoPubMedCCDC14
iHOPCCDC14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:58:22 CET 2017

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