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CCDC144NL-AS1 (CCDC144NL antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) CCDC144NL-AS1
LocusID (NCBI) 440416
Atlas_Id 61493
Location 17p11.2  [Link to chromosome band 17p11]
Location_base_pair Starts at 20868433 and ends at 20905230 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC144NL-AS1   51340
Cards
Entrez_Gene (NCBI)CCDC144NL-AS1  440416  CCDC144NL antisense RNA 1
Aliases
GeneCards (Weizmann)CCDC144NL-AS1
Ensembl hg19 (Hinxton)ENSG00000233098 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233098 [Gene_View]  chr17:20868433-20905230 [Contig_View]  CCDC144NL-AS1 [Vega]
ICGC DataPortalENSG00000233098
TCGA cBioPortalCCDC144NL-AS1
AceView (NCBI)CCDC144NL-AS1
Genatlas (Paris)CCDC144NL-AS1
WikiGenes440416
SOURCE (Princeton)CCDC144NL-AS1
Genetics Home Reference (NIH)CCDC144NL-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC144NL-AS1  -     chr17:20868433-20905230 +  17p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC144NL-AS1  -     17p11.2   [Description]    (hg19-Feb_2009)
EnsemblCCDC144NL-AS1 - 17p11.2 [CytoView hg19]  CCDC144NL-AS1 - 17p11.2 [CytoView hg38]
Mapping of homologs : NCBICCDC144NL-AS1 [Mapview hg19]  CCDC144NL-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057473 BC041488 BC072410 BC113722 BC117395
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC144NL-AS1
Cluster EST : UnigeneHs.661076 [ NCBI ]
CGAP (NCI)Hs.661076
Alternative Splicing GalleryENSG00000233098
Gene ExpressionCCDC144NL-AS1 [ NCBI-GEO ]   CCDC144NL-AS1 [ EBI - ARRAY_EXPRESS ]   CCDC144NL-AS1 [ SEEK ]   CCDC144NL-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC144NL-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440416
GTEX Portal (Tissue expression)CCDC144NL-AS1
Human Protein AtlasENSG00000233098-CCDC144NL-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC144NL-AS1
DMDM Disease mutations440416
Blocks (Seattle)CCDC144NL-AS1
Human Protein Atlas [tissue]ENSG00000233098-CCDC144NL-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000233098
BioGRIDCCDC144NL-AS1
STRING (EMBL)CCDC144NL-AS1
ZODIACCCDC144NL-AS1
Ontologies - Pathways
Huge Navigator CCDC144NL-AS1 [HugePedia]
snp3D : Map Gene to Disease440416
BioCentury BCIQCCDC144NL-AS1
ClinGenCCDC144NL-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440416
Clinical trialCCDC144NL-AS1
Miscellaneous
canSAR (ICR)CCDC144NL-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC144NL-AS1
EVEXCCDC144NL-AS1
GoPubMedCCDC144NL-AS1
iHOPCCDC144NL-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:35:06 CET 2017

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