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CCDC146 (coiled-coil domain containing 146)

Identity

Alias (NCBI)MBO2
HGNC (Hugo) CCDC146
HGNC Alias symbKIAA1505
LocusID (NCBI) 57639
Atlas_Id 61494
Location 7q11.23  [Link to chromosome band 7q11]
Location_base_pair Starts at 77122615 and ends at 77295204 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CCDC146 (7q11.23) / EPB41L4B (9q31.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CCDC146   29296
Cards
Entrez_Gene (NCBI)CCDC146    coiled-coil domain containing 146
AliasesMBO2
GeneCards (Weizmann)CCDC146
Ensembl hg19 (Hinxton)ENSG00000135205 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135205 [Gene_View]  ENSG00000135205 [Sequence]  chr7:77122615-77295204 [Contig_View]  CCDC146 [Vega]
ICGC DataPortalENSG00000135205
TCGA cBioPortalCCDC146
AceView (NCBI)CCDC146
Genatlas (Paris)CCDC146
SOURCE (Princeton)CCDC146
Genetics Home Reference (NIH)CCDC146
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC146  -     chr7:77122615-77295204 +  7q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC146  -     7q11.23   [Description]    (hg19-Feb_2009)
GoldenPathCCDC146 - 7q11.23 [CytoView hg19]  CCDC146 - 7q11.23 [CytoView hg38]
ImmunoBaseENSG00000135205
Genome Data Viewer NCBICCDC146 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB040938 AF461817 AK056542 AK292491 BC029458
RefSeq transcript (Entrez)NM_020879
Consensus coding sequences : CCDS (NCBI)CCDC146
Gene ExpressionCCDC146 [ NCBI-GEO ]   CCDC146 [ EBI - ARRAY_EXPRESS ]   CCDC146 [ SEEK ]   CCDC146 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC146 [ Firebrowse - Broad ]
GenevisibleExpression of CCDC146 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57639
GTEX Portal (Tissue expression)CCDC146
Human Protein AtlasENSG00000135205-CCDC146 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IYE0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IYE0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IYE0
PhosPhoSitePlusQ8IYE0
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC146
SuperfamilyQ8IYE0
AlphaFold pdb e-kbQ8IYE0   
Human Protein Atlas [tissue]ENSG00000135205-CCDC146 [tissue]
HPRD11150
Protein Interaction databases
DIP (DOE-UCLA)Q8IYE0
IntAct (EBI)Q8IYE0
BioGRIDCCDC146
STRING (EMBL)CCDC146
ZODIACCCDC146
Ontologies - Pathways
QuickGOQ8IYE0
Ontology : AmiGOprotein binding  cytoplasm  centriole  cytoskeleton  
Ontology : EGO-EBIprotein binding  cytoplasm  centriole  cytoskeleton  
NDEx NetworkCCDC146
Atlas of Cancer Signalling NetworkCCDC146
Wikipedia pathwaysCCDC146
Orthology - Evolution
OrthoDB57639
GeneTree (enSembl)ENSG00000135205
Phylogenetic Trees/Animal Genes : TreeFamCCDC146
Homologs : HomoloGeneCCDC146
Homology/Alignments : Family Browser (UCSC)CCDC146
Gene fusions - Rearrangements
Fusion : QuiverCCDC146
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC146 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC146
dbVarCCDC146
ClinVarCCDC146
MonarchCCDC146
1000_GenomesCCDC146 
Exome Variant ServerCCDC146
GNOMAD BrowserENSG00000135205
Varsome BrowserCCDC146
ACMGCCDC146 variants
VarityQ8IYE0
Genomic Variants (DGV)CCDC146 [DGVbeta]
DECIPHERCCDC146 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC146 
Mutations
ICGC Data PortalCCDC146 
TCGA Data PortalCCDC146 
Broad Tumor PortalCCDC146
OASIS PortalCCDC146 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCDC146  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCCDC146
Mutations and Diseases : HGMDCCDC146
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCCDC146
DgiDB (Drug Gene Interaction Database)CCDC146
DoCM (Curated mutations)CCDC146
CIViC (Clinical Interpretations of Variants in Cancer)CCDC146
Cancer3DCCDC146
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETCCDC146
MedgenCCDC146
Genetic Testing Registry CCDC146
NextProtQ8IYE0 [Medical]
GENETestsCCDC146
Target ValidationCCDC146
Huge Navigator CCDC146 [HugePedia]
ClinGenCCDC146
Clinical trials, drugs, therapy
MyCancerGenomeCCDC146
Protein Interactions : CTDCCDC146
Pharm GKB GenePA162381475
PharosQ8IYE0
Clinical trialCCDC146
Miscellaneous
canSAR (ICR)CCDC146
HarmonizomeCCDC146
DataMed IndexCCDC146
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCCDC146
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:45:04 CEST 2021

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