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CCDC151 (coiled-coil domain containing 151)

Identity

Alias_symbol (synonym)MGC20983
Other aliasCILD30
HGNC (Hugo) CCDC151
LocusID (NCBI) 115948
Atlas_Id 61501
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 11531273 and ends at 11546603 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
KRI1 (19p13.2) / CCDC151 (19p13.2)RANGAP1 (22q13.2) / CCDC151 (19p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC151   28303
Cards
Entrez_Gene (NCBI)CCDC151  115948  coiled-coil domain containing 151
AliasesCILD30
GeneCards (Weizmann)CCDC151
Ensembl hg19 (Hinxton)ENSG00000198003 [Gene_View]  chr19:11531273-11546603 [Contig_View]  CCDC151 [Vega]
Ensembl hg38 (Hinxton)ENSG00000198003 [Gene_View]  chr19:11531273-11546603 [Contig_View]  CCDC151 [Vega]
ICGC DataPortalENSG00000198003
TCGA cBioPortalCCDC151
AceView (NCBI)CCDC151
Genatlas (Paris)CCDC151
WikiGenes115948
SOURCE (Princeton)CCDC151
Genetics Home Reference (NIH)CCDC151
Genomic and cartography
GoldenPath hg19 (UCSC)CCDC151  -     chr19:11531273-11546603 -  19p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CCDC151  -     19p13.2   [Description]    (hg38-Dec_2013)
EnsemblCCDC151 - 19p13.2 [CytoView hg19]  CCDC151 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBICCDC151 [Mapview hg19]  CCDC151 [Mapview hg38]
OMIM615956   616037   
Gene and transcription
Genbank (Entrez)AK056363 AK294355 AK302113 AK308072 BC014252
RefSeq transcript (Entrez)NM_001302453 NM_001302454 NM_145045
RefSeq genomic (Entrez)NC_000019 NC_018930 NG_041777 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)CCDC151
Cluster EST : UnigeneHs.124010 [ NCBI ]
CGAP (NCI)Hs.124010
Alternative Splicing GalleryENSG00000198003
Gene ExpressionCCDC151 [ NCBI-GEO ]   CCDC151 [ EBI - ARRAY_EXPRESS ]   CCDC151 [ SEEK ]   CCDC151 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC151 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)115948
GTEX Portal (Tissue expression)CCDC151
Protein : pattern, domain, 3D structure
UniProt/SwissProtA5D8V7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA5D8V7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA5D8V7
Splice isoforms : SwissVarA5D8V7
PhosPhoSitePlusA5D8V7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC151
DMDM Disease mutations115948
Blocks (Seattle)CCDC151
SuperfamilyA5D8V7
Human Protein AtlasENSG00000198003
Peptide AtlasA5D8V7
HPRD10076
IPIIPI00072644   IPI01012650   IPI01011825   
Protein Interaction databases
DIP (DOE-UCLA)A5D8V7
IntAct (EBI)A5D8V7
FunCoupENSG00000198003
BioGRIDCCDC151
STRING (EMBL)CCDC151
ZODIACCCDC151
Ontologies - Pathways
QuickGOA5D8V7
Ontology : AmiGOcilium movement  protein binding  centriole  cilium  axoneme  determination of left/right symmetry  ciliary basal body  outer dynein arm assembly  regulation of cilium assembly  
Ontology : EGO-EBIcilium movement  protein binding  centriole  cilium  axoneme  determination of left/right symmetry  ciliary basal body  outer dynein arm assembly  regulation of cilium assembly  
NDEx NetworkCCDC151
Atlas of Cancer Signalling NetworkCCDC151
Wikipedia pathwaysCCDC151
Orthology - Evolution
OrthoDB115948
GeneTree (enSembl)ENSG00000198003
Phylogenetic Trees/Animal Genes : TreeFamCCDC151
HOVERGENA5D8V7
HOGENOMA5D8V7
Homologs : HomoloGeneCCDC151
Homology/Alignments : Family Browser (UCSC)CCDC151
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC151 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC151
dbVarCCDC151
ClinVarCCDC151
1000_GenomesCCDC151 
Exome Variant ServerCCDC151
ExAC (Exome Aggregation Consortium)CCDC151 (select the gene name)
Genetic variants : HAPMAP115948
Genomic Variants (DGV)CCDC151 [DGVbeta]
DECIPHER (Syndromes)19:11531273-11546603  ENSG00000198003
CONAN: Copy Number AnalysisCCDC151 
Mutations
ICGC Data PortalCCDC151 
TCGA Data PortalCCDC151 
Broad Tumor PortalCCDC151
OASIS PortalCCDC151 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCDC151  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCDC151
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCDC151
DgiDB (Drug Gene Interaction Database)CCDC151
DoCM (Curated mutations)CCDC151 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC151 (select a term)
intoGenCCDC151
Cancer3DCCDC151(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615956    616037   
Orphanet665   
MedgenCCDC151
Genetic Testing Registry CCDC151
NextProtA5D8V7 [Medical]
TSGene115948
GENETestsCCDC151
Huge Navigator CCDC151 [HugePedia]
snp3D : Map Gene to Disease115948
BioCentury BCIQCCDC151
ClinGenCCDC151
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD115948
Chemical/Pharm GKB GenePA162381584
Clinical trialCCDC151
Miscellaneous
canSAR (ICR)CCDC151 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC151
EVEXCCDC151
GoPubMedCCDC151
iHOPCCDC151
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 11:58:25 CET 2017

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