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CCDC176 (coiled-coil domain containing 176)

Identity

Other aliasC14orf45
HGNC (Hugo) CCDC176
LocusID (NCBI) 80127
Atlas_Id 61522
Location 14q24.3  [Link to chromosome band 14q24]
Location_base_pair Starts at 74486059 and ends at 74532796 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC176   19855
Cards
Entrez_Gene (NCBI)CCDC176  80127  coiled-coil domain containing 176
AliasesC14orf45
GeneCards (Weizmann)CCDC176
Ensembl hg19 (Hinxton)ENSG00000119636 [Gene_View]  chr14:74486059-74532796 [Contig_View]  CCDC176 [Vega]
Ensembl hg38 (Hinxton)ENSG00000119636 [Gene_View]  chr14:74486059-74532796 [Contig_View]  CCDC176 [Vega]
ICGC DataPortalENSG00000119636
TCGA cBioPortalCCDC176
AceView (NCBI)CCDC176
Genatlas (Paris)CCDC176
WikiGenes80127
SOURCE (Princeton)CCDC176
Genetics Home Reference (NIH)CCDC176
Genomic and cartography
GoldenPath hg19 (UCSC)CCDC176  -     chr14:74486059-74532796 +  14q24.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CCDC176  -     14q24.3   [Description]    (hg38-Dec_2013)
EnsemblCCDC176 - 14q24.3 [CytoView hg19]  CCDC176 - 14q24.3 [CytoView hg38]
Mapping of homologs : NCBICCDC176 [Mapview hg19]  CCDC176 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026842 AK097531 AL834487 BC044808 BC104979
RefSeq transcript (Entrez)NM_025057
RefSeq genomic (Entrez)NC_000014 NC_018925 NG_033060 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)CCDC176
Cluster EST : UnigeneHs.644621 [ NCBI ]
CGAP (NCI)Hs.644621
Alternative Splicing GalleryENSG00000119636
Gene ExpressionCCDC176 [ NCBI-GEO ]   CCDC176 [ EBI - ARRAY_EXPRESS ]   CCDC176 [ SEEK ]   CCDC176 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC176 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80127
GTEX Portal (Tissue expression)CCDC176
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8ND07   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8ND07  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8ND07
Splice isoforms : SwissVarQ8ND07
PhosPhoSitePlusQ8ND07
Domains : Interpro (EBI)Bbof1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC176
DMDM Disease mutations80127
Blocks (Seattle)CCDC176
SuperfamilyQ8ND07
Human Protein AtlasENSG00000119636
Peptide AtlasQ8ND07
HPRD12650
IPIIPI00171500   IPI01026556   IPI01026588   IPI01026214   
Protein Interaction databases
DIP (DOE-UCLA)Q8ND07
IntAct (EBI)Q8ND07
FunCoupENSG00000119636
BioGRIDCCDC176
STRING (EMBL)CCDC176
ZODIACCCDC176
Ontologies - Pathways
QuickGOQ8ND07
Ontology : AmiGOcytoplasm  ciliary basal body  motile cilium assembly  
Ontology : EGO-EBIcytoplasm  ciliary basal body  motile cilium assembly  
NDEx NetworkCCDC176
Atlas of Cancer Signalling NetworkCCDC176
Wikipedia pathwaysCCDC176
Orthology - Evolution
OrthoDB80127
GeneTree (enSembl)ENSG00000119636
Phylogenetic Trees/Animal Genes : TreeFamCCDC176
HOVERGENQ8ND07
HOGENOMQ8ND07
Homologs : HomoloGeneCCDC176
Homology/Alignments : Family Browser (UCSC)CCDC176
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC176 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC176
dbVarCCDC176
ClinVarCCDC176
1000_GenomesCCDC176 
Exome Variant ServerCCDC176
ExAC (Exome Aggregation Consortium)CCDC176 (select the gene name)
Genetic variants : HAPMAP80127
Genomic Variants (DGV)CCDC176 [DGVbeta]
DECIPHER (Syndromes)14:74486059-74532796  ENSG00000119636
CONAN: Copy Number AnalysisCCDC176 
Mutations
ICGC Data PortalCCDC176 
TCGA Data PortalCCDC176 
Broad Tumor PortalCCDC176
OASIS PortalCCDC176 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCCDC176
BioMutasearch CCDC176
DgiDB (Drug Gene Interaction Database)CCDC176
DoCM (Curated mutations)CCDC176 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC176 (select a term)
intoGenCCDC176
Cancer3DCCDC176(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCCDC176
Genetic Testing Registry CCDC176
NextProtQ8ND07 [Medical]
TSGene80127
GENETestsCCDC176
Huge Navigator CCDC176 [HugePedia]
snp3D : Map Gene to Disease80127
BioCentury BCIQCCDC176
ClinGenCCDC176
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80127
Chemical/Pharm GKB GenePA134886442
Clinical trialCCDC176
Miscellaneous
canSAR (ICR)CCDC176 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC176
EVEXCCDC176
GoPubMedCCDC176
iHOPCCDC176
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:58:30 CET 2017

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