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CCDC177 (coiled-coil domain containing 177)

Identity

Alias_namesC14orf162
chromosome 14 open reading frame 162
Alias_symbol (synonym)PLPL
Other alias
HGNC (Hugo) CCDC177
LocusID (NCBI) 56936
Atlas_Id 61523
Location 14q24.1  [Link to chromosome band 14q24]
Location_base_pair Starts at 69569814 and ends at 69574883 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC177   23243
Cards
Entrez_Gene (NCBI)CCDC177  56936  coiled-coil domain containing 177
AliasesC14orf162; PLPL
GeneCards (Weizmann)CCDC177
Ensembl hg19 (Hinxton)ENSG00000267909 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267909 [Gene_View]  chr14:69569814-69574883 [Contig_View]  CCDC177 [Vega]
ICGC DataPortalENSG00000267909
TCGA cBioPortalCCDC177
AceView (NCBI)CCDC177
Genatlas (Paris)CCDC177
WikiGenes56936
SOURCE (Princeton)CCDC177
Genetics Home Reference (NIH)CCDC177
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC177  -     chr14:69569814-69574883 -  14q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC177  -     14q24.1   [Description]    (hg19-Feb_2009)
EnsemblCCDC177 - 14q24.1 [CytoView hg19]  CCDC177 - 14q24.1 [CytoView hg38]
Mapping of homologs : NCBICCDC177 [Mapview hg19]  CCDC177 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF284217 AK312175 BC105025 BC105027
RefSeq transcript (Entrez)NM_001271507 NM_020181
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC177
Cluster EST : UnigeneHs.458319 [ NCBI ]
CGAP (NCI)Hs.458319
Alternative Splicing GalleryENSG00000267909
Gene ExpressionCCDC177 [ NCBI-GEO ]   CCDC177 [ EBI - ARRAY_EXPRESS ]   CCDC177 [ SEEK ]   CCDC177 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC177 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56936
GTEX Portal (Tissue expression)CCDC177
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NQR7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NQR7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NQR7
Splice isoforms : SwissVarQ9NQR7
PhosPhoSitePlusQ9NQR7
Domains : Interpro (EBI)DUF4659   
Domain families : Pfam (Sanger)DUF4659 (PF15558)   
Domain families : Pfam (NCBI)pfam15558   
Conserved Domain (NCBI)CCDC177
DMDM Disease mutations56936
Blocks (Seattle)CCDC177
SuperfamilyQ9NQR7
Human Protein AtlasENSG00000267909
Peptide AtlasQ9NQR7
HPRD16614
IPIIPI00024604   
Protein Interaction databases
DIP (DOE-UCLA)Q9NQR7
IntAct (EBI)Q9NQR7
FunCoupENSG00000267909
BioGRIDCCDC177
STRING (EMBL)CCDC177
ZODIACCCDC177
Ontologies - Pathways
QuickGOQ9NQR7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkCCDC177
Atlas of Cancer Signalling NetworkCCDC177
Wikipedia pathwaysCCDC177
Orthology - Evolution
OrthoDB56936
GeneTree (enSembl)ENSG00000267909
Phylogenetic Trees/Animal Genes : TreeFamCCDC177
HOVERGENQ9NQR7
HOGENOMQ9NQR7
Homologs : HomoloGeneCCDC177
Homology/Alignments : Family Browser (UCSC)CCDC177
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC177 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC177
dbVarCCDC177
ClinVarCCDC177
1000_GenomesCCDC177 
Exome Variant ServerCCDC177
ExAC (Exome Aggregation Consortium)CCDC177 (select the gene name)
Genetic variants : HAPMAP56936
Genomic Variants (DGV)CCDC177 [DGVbeta]
DECIPHERCCDC177 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC177 
Mutations
ICGC Data PortalCCDC177 
TCGA Data PortalCCDC177 
Broad Tumor PortalCCDC177
OASIS PortalCCDC177 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCCDC177
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
BioMutasearch CCDC177
DgiDB (Drug Gene Interaction Database)CCDC177
DoCM (Curated mutations)CCDC177 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC177 (select a term)
intoGenCCDC177
Cancer3DCCDC177(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCCDC177
Genetic Testing Registry CCDC177
NextProtQ9NQR7 [Medical]
TSGene56936
GENETestsCCDC177
Target ValidationCCDC177
Huge Navigator CCDC177 [HugePedia]
snp3D : Map Gene to Disease56936
BioCentury BCIQCCDC177
ClinGenCCDC177
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56936
Chemical/Pharm GKB GenePA134892125
Clinical trialCCDC177
Miscellaneous
canSAR (ICR)CCDC177 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC177
EVEXCCDC177
GoPubMedCCDC177
iHOPCCDC177
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:42:32 CEST 2017

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