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CCDC18-AS1 (CCDC18 antisense RNA 1)

Identity

Alias (NCBI)-
HGNC (Hugo) CCDC18-AS1
HGNC Alias symbENST00000440778.1
LocusID (NCBI) 100131564
Atlas_Id 77814
Location 1p22.1  [Link to chromosome band 1p22]
Location_base_pair Starts at 93310109 and ends at 93345811 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)CCDC18-AS1   52262
Cards
Entrez_Gene (NCBI)CCDC18-AS1    CCDC18 antisense RNA 1
Aliases
GeneCards (Weizmann)CCDC18-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr1:93310109-93345811 [Contig_View]  CCDC18-AS1 [Vega]
TCGA cBioPortalCCDC18-AS1
AceView (NCBI)CCDC18-AS1
Genatlas (Paris)CCDC18-AS1
SOURCE (Princeton)CCDC18-AS1
Genetics Home Reference (NIH)CCDC18-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC18-AS1  -     chr1:93310109-93345811 -  1p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC18-AS1  -     1p22.1   [Description]    (hg19-Feb_2009)
GoldenPathCCDC18-AS1 - 1p22.1 [CytoView hg19]  CCDC18-AS1 - 1p22.1 [CytoView hg38]
Genome Data Viewer NCBICCDC18-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK021668 AK124955 AL832786 OA985445 OA985446
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC18-AS1
Gene ExpressionCCDC18-AS1 [ NCBI-GEO ]   CCDC18-AS1 [ EBI - ARRAY_EXPRESS ]   CCDC18-AS1 [ SEEK ]   CCDC18-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC18-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of CCDC18-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100131564
GTEX Portal (Tissue expression)CCDC18-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC18-AS1
Protein Interaction databases
BioGRIDCCDC18-AS1
STRING (EMBL)CCDC18-AS1
ZODIACCCDC18-AS1
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCCDC18-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:45:13 CEST 2021

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