Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CCDC18-AS1 (CCDC18 antisense RNA 1)


Alias (NCBI)-
HGNC (Hugo) CCDC18-AS1
HGNC Alias symbENST00000440778.1
LocusID (NCBI) 100131564
Atlas_Id 77814
Location 1p22.1  [Link to chromosome band 1p22]
Location_base_pair Starts at 93310109 and ends at 93345811 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)CCDC18-AS1   52262
Entrez_Gene (NCBI)CCDC18-AS1    CCDC18 antisense RNA 1
GeneCards (Weizmann)CCDC18-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr1:93310109-93345811 [Contig_View]  CCDC18-AS1 [Vega]
TCGA cBioPortalCCDC18-AS1
AceView (NCBI)CCDC18-AS1
Genatlas (Paris)CCDC18-AS1
SOURCE (Princeton)CCDC18-AS1
Genetics Home Reference (NIH)CCDC18-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC18-AS1  -     chr1:93310109-93345811 -  1p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC18-AS1  -     1p22.1   [Description]    (hg19-Feb_2009)
GoldenPathCCDC18-AS1 - 1p22.1 [CytoView hg19]  CCDC18-AS1 - 1p22.1 [CytoView hg38]
Genome Data Viewer NCBICCDC18-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK021668 AK124955 AL832786 OA985445 OA985446
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC18-AS1
Gene ExpressionCCDC18-AS1 [ NCBI-GEO ]   CCDC18-AS1 [ EBI - ARRAY_EXPRESS ]   CCDC18-AS1 [ SEEK ]   CCDC18-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC18-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of CCDC18-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100131564
GTEX Portal (Tissue expression)CCDC18-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC18-AS1
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:45:13 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us