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CCDC181 (coiled-coil domain containing 181)

Identity

Alias_namesC1orf114
chromosome 1 open reading frame 114
Alias_symbol (synonym)FLJ25846
Other alias
HGNC (Hugo) CCDC181
LocusID (NCBI) 57821
Atlas_Id 53624
Location 1q24.2  [Link to chromosome band 1q24]
Location_base_pair Starts at 169394870 and ends at 169460669 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZNFX1 (20q13.13) / CCDC181 (1q24.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC181   28051
Cards
Entrez_Gene (NCBI)CCDC181  57821  coiled-coil domain containing 181
AliasesC1orf114
GeneCards (Weizmann)CCDC181
Ensembl hg19 (Hinxton)ENSG00000117477 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000117477 [Gene_View]  chr1:169394870-169460669 [Contig_View]  CCDC181 [Vega]
ICGC DataPortalENSG00000117477
TCGA cBioPortalCCDC181
AceView (NCBI)CCDC181
Genatlas (Paris)CCDC181
WikiGenes57821
SOURCE (Princeton)CCDC181
Genetics Home Reference (NIH)CCDC181
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC181  -     chr1:169394870-169460669 -  1q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC181  -     1q24.2   [Description]    (hg19-Feb_2009)
EnsemblCCDC181 - 1q24.2 [CytoView hg19]  CCDC181 - 1q24.2 [CytoView hg38]
Mapping of homologs : NCBICCDC181 [Mapview hg19]  CCDC181 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK098712 AK223354 AK313598 AL049687 BC008388
RefSeq transcript (Entrez)NM_001300968 NM_001300969 NM_021179
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC181
Cluster EST : UnigeneHs.708673 [ NCBI ]
CGAP (NCI)Hs.708673
Alternative Splicing GalleryENSG00000117477
Gene ExpressionCCDC181 [ NCBI-GEO ]   CCDC181 [ EBI - ARRAY_EXPRESS ]   CCDC181 [ SEEK ]   CCDC181 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC181 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57821
GTEX Portal (Tissue expression)CCDC181
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5TID7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5TID7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5TID7
Splice isoforms : SwissVarQ5TID7
PhosPhoSitePlusQ5TID7
Domains : Interpro (EBI)CCDC181   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC181
DMDM Disease mutations57821
Blocks (Seattle)CCDC181
SuperfamilyQ5TID7
Human Protein AtlasENSG00000117477
Peptide AtlasQ5TID7
HPRD14258
IPIIPI00009604   IPI00644821   IPI00645609   
Protein Interaction databases
DIP (DOE-UCLA)Q5TID7
IntAct (EBI)Q5TID7
FunCoupENSG00000117477
BioGRIDCCDC181
STRING (EMBL)CCDC181
ZODIACCCDC181
Ontologies - Pathways
QuickGOQ5TID7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkCCDC181
Atlas of Cancer Signalling NetworkCCDC181
Wikipedia pathwaysCCDC181
Orthology - Evolution
OrthoDB57821
GeneTree (enSembl)ENSG00000117477
Phylogenetic Trees/Animal Genes : TreeFamCCDC181
HOVERGENQ5TID7
HOGENOMQ5TID7
Homologs : HomoloGeneCCDC181
Homology/Alignments : Family Browser (UCSC)CCDC181
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC181 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC181
dbVarCCDC181
ClinVarCCDC181
1000_GenomesCCDC181 
Exome Variant ServerCCDC181
ExAC (Exome Aggregation Consortium)CCDC181 (select the gene name)
Genetic variants : HAPMAP57821
Genomic Variants (DGV)CCDC181 [DGVbeta]
DECIPHERCCDC181 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC181 
Mutations
ICGC Data PortalCCDC181 
TCGA Data PortalCCDC181 
Broad Tumor PortalCCDC181
OASIS PortalCCDC181 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCCDC181
BioMutasearch CCDC181
DgiDB (Drug Gene Interaction Database)CCDC181
DoCM (Curated mutations)CCDC181 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC181 (select a term)
intoGenCCDC181
Cancer3DCCDC181(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCCDC181
Genetic Testing Registry CCDC181
NextProtQ5TID7 [Medical]
TSGene57821
GENETestsCCDC181
Target ValidationCCDC181
Huge Navigator CCDC181 [HugePedia]
snp3D : Map Gene to Disease57821
BioCentury BCIQCCDC181
ClinGenCCDC181
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57821
Chemical/Pharm GKB GenePA142672498
Clinical trialCCDC181
Miscellaneous
canSAR (ICR)CCDC181 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC181
EVEXCCDC181
GoPubMedCCDC181
iHOPCCDC181
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:48:54 CEST 2017

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