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CCDC185 (coiled-coil domain containing 185)

Identity

Alias_namesC1orf65
chromosome 1 open reading frame 65
Alias_symbol (synonym)FLJ35728
Other alias
HGNC (Hugo) CCDC185
LocusID (NCBI) 164127
Atlas_Id 61531
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 223393373 and ends at 223395470 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC185   26654
Cards
Entrez_Gene (NCBI)CCDC185  164127  coiled-coil domain containing 185
AliasesC1orf65
GeneCards (Weizmann)CCDC185
Ensembl hg19 (Hinxton)ENSG00000178395 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178395 [Gene_View]  chr1:223393373-223395470 [Contig_View]  CCDC185 [Vega]
ICGC DataPortalENSG00000178395
TCGA cBioPortalCCDC185
AceView (NCBI)CCDC185
Genatlas (Paris)CCDC185
WikiGenes164127
SOURCE (Princeton)CCDC185
Genetics Home Reference (NIH)CCDC185
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC185  -     chr1:223393373-223395470 +  1q41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC185  -     1q41   [Description]    (hg19-Feb_2009)
EnsemblCCDC185 - 1q41 [CytoView hg19]  CCDC185 - 1q41 [CytoView hg38]
Mapping of homologs : NCBICCDC185 [Mapview hg19]  CCDC185 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093047 BC030026 BC031066 DB446947 JF432796
RefSeq transcript (Entrez)NM_152610
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC185
Cluster EST : UnigeneHs.192090 [ NCBI ]
CGAP (NCI)Hs.192090
Alternative Splicing GalleryENSG00000178395
Gene ExpressionCCDC185 [ NCBI-GEO ]   CCDC185 [ EBI - ARRAY_EXPRESS ]   CCDC185 [ SEEK ]   CCDC185 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC185 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)164127
GTEX Portal (Tissue expression)CCDC185
Human Protein AtlasENSG00000178395-CCDC185 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N715   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N715  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N715
Splice isoforms : SwissVarQ8N715
PhosPhoSitePlusQ8N715
Domains : Interpro (EBI)DUF4659   
Domain families : Pfam (Sanger)DUF4659 (PF15558)   
Domain families : Pfam (NCBI)pfam15558   
Conserved Domain (NCBI)CCDC185
DMDM Disease mutations164127
Blocks (Seattle)CCDC185
SuperfamilyQ8N715
Human Protein Atlas [tissue]ENSG00000178395-CCDC185 [tissue]
Peptide AtlasQ8N715
HPRD08761
IPIIPI00297462   
Protein Interaction databases
DIP (DOE-UCLA)Q8N715
IntAct (EBI)Q8N715
FunCoupENSG00000178395
BioGRIDCCDC185
STRING (EMBL)CCDC185
ZODIACCCDC185
Ontologies - Pathways
QuickGOQ8N715
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkCCDC185
Atlas of Cancer Signalling NetworkCCDC185
Wikipedia pathwaysCCDC185
Orthology - Evolution
OrthoDB164127
GeneTree (enSembl)ENSG00000178395
Phylogenetic Trees/Animal Genes : TreeFamCCDC185
HOVERGENQ8N715
HOGENOMQ8N715
Homologs : HomoloGeneCCDC185
Homology/Alignments : Family Browser (UCSC)CCDC185
Gene fusions - Rearrangements
Fusion: Tumor Portal CCDC185
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC185 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC185
dbVarCCDC185
ClinVarCCDC185
1000_GenomesCCDC185 
Exome Variant ServerCCDC185
ExAC (Exome Aggregation Consortium)ENSG00000178395
GNOMAD BrowserENSG00000178395
Genetic variants : HAPMAP164127
Genomic Variants (DGV)CCDC185 [DGVbeta]
DECIPHERCCDC185 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC185 
Mutations
ICGC Data PortalCCDC185 
TCGA Data PortalCCDC185 
Broad Tumor PortalCCDC185
OASIS PortalCCDC185 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCCDC185
BioMutasearch CCDC185
DgiDB (Drug Gene Interaction Database)CCDC185
DoCM (Curated mutations)CCDC185 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC185 (select a term)
intoGenCCDC185
Cancer3DCCDC185(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCCDC185
Genetic Testing Registry CCDC185
NextProtQ8N715 [Medical]
TSGene164127
GENETestsCCDC185
Target ValidationCCDC185
Huge Navigator CCDC185 [HugePedia]
snp3D : Map Gene to Disease164127
BioCentury BCIQCCDC185
ClinGenCCDC185
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD164127
Chemical/Pharm GKB GenePA142672515
Clinical trialCCDC185
Miscellaneous
canSAR (ICR)CCDC185 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC185
EVEXCCDC185
GoPubMedCCDC185
iHOPCCDC185
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:41:42 CET 2017

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