Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CCDC186 (coiled-coil domain containing 186)

Identity

Alias (NCBI)C10orf118
CCCP-1
CCCP1
golgin104
HGNC (Hugo) CCDC186
HGNC Alias symbFLJ10188
FLJ35301
CCCP-1
golgin104
HGNC Previous nameC10orf118
HGNC Previous namechromosome 10 open reading frame 118
LocusID (NCBI) 55088
Atlas_Id 861
Location 10q25.3  [Link to chromosome band 10q25]
Location_base_pair Starts at 114161608 and ends at 114174220 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PRMT1 (19q13.33) / CCDC186 (10q25.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CCDC186   24349
Cards
Entrez_Gene (NCBI)CCDC186    coiled-coil domain containing 186
AliasesC10orf118; CCCP-1; CCCP1; golgin104
GeneCards (Weizmann)CCDC186
Ensembl hg19 (Hinxton)ENSG00000165813 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165813 [Gene_View]  ENSG00000165813 [Sequence]  chr10:114161608-114174220 [Contig_View]  CCDC186 [Vega]
ICGC DataPortalENSG00000165813
TCGA cBioPortalCCDC186
AceView (NCBI)CCDC186
Genatlas (Paris)CCDC186
SOURCE (Princeton)CCDC186
Genetics Home Reference (NIH)CCDC186
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC186  -     chr10:114161608-114174220 -  10q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC186  -     10q25.3   [Description]    (hg19-Feb_2009)
GoldenPathCCDC186 - 10q25.3 [CytoView hg19]  CCDC186 - 10q25.3 [CytoView hg38]
ImmunoBaseENSG00000165813
Genome Data Viewer NCBICCDC186 [Mapview hg19]  
OMIM619249   
Gene and transcription
Genbank (Entrez)AF273054 AI143965 AI672382 AK001050 AK024739
RefSeq transcript (Entrez)NM_001321829 NM_018017 NM_153249
Consensus coding sequences : CCDS (NCBI)CCDC186
Gene ExpressionCCDC186 [ NCBI-GEO ]   CCDC186 [ EBI - ARRAY_EXPRESS ]   CCDC186 [ SEEK ]   CCDC186 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC186 [ Firebrowse - Broad ]
GenevisibleExpression of CCDC186 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55088
GTEX Portal (Tissue expression)CCDC186
Human Protein AtlasENSG00000165813-CCDC186 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z3E2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z3E2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z3E2
PhosPhoSitePlusQ7Z3E2
Domains : Interpro (EBI)CCDC186   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC186
SuperfamilyQ7Z3E2
AlphaFold pdb e-kbQ7Z3E2   
Human Protein Atlas [tissue]ENSG00000165813-CCDC186 [tissue]
HPRD16576
Protein Interaction databases
DIP (DOE-UCLA)Q7Z3E2
IntAct (EBI)Q7Z3E2
BioGRIDCCDC186
STRING (EMBL)CCDC186
ZODIACCCDC186
Ontologies - Pathways
QuickGOQ7Z3E2
Ontology : AmiGOtrans-Golgi network  response to bacterium  small GTPase binding  insulin secretion involved in cellular response to glucose stimulus  vesicle cytoskeletal trafficking  
Ontology : EGO-EBItrans-Golgi network  response to bacterium  small GTPase binding  insulin secretion involved in cellular response to glucose stimulus  vesicle cytoskeletal trafficking  
NDEx NetworkCCDC186
Atlas of Cancer Signalling NetworkCCDC186
Wikipedia pathwaysCCDC186
Orthology - Evolution
OrthoDB55088
GeneTree (enSembl)ENSG00000165813
Phylogenetic Trees/Animal Genes : TreeFamCCDC186
Homologs : HomoloGeneCCDC186
Homology/Alignments : Family Browser (UCSC)CCDC186
Gene fusions - Rearrangements
Fusion : QuiverCCDC186
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC186 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC186
dbVarCCDC186
ClinVarCCDC186
MonarchCCDC186
1000_GenomesCCDC186 
Exome Variant ServerCCDC186
GNOMAD BrowserENSG00000165813
Varsome BrowserCCDC186
ACMGCCDC186 variants
VarityQ7Z3E2
Genomic Variants (DGV)CCDC186 [DGVbeta]
DECIPHERCCDC186 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC186 
Mutations
ICGC Data PortalCCDC186 
TCGA Data PortalCCDC186 
Broad Tumor PortalCCDC186
OASIS PortalCCDC186 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCDC186  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCCDC186
Mutations and Diseases : HGMDCCDC186
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCCDC186
DgiDB (Drug Gene Interaction Database)CCDC186
DoCM (Curated mutations)CCDC186
CIViC (Clinical Interpretations of Variants in Cancer)CCDC186
Cancer3DCCDC186
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM619249   
Orphanet
DisGeNETCCDC186
MedgenCCDC186
Genetic Testing Registry CCDC186
NextProtQ7Z3E2 [Medical]
GENETestsCCDC186
Target ValidationCCDC186
Huge Navigator CCDC186 [HugePedia]
ClinGenCCDC186
Clinical trials, drugs, therapy
MyCancerGenomeCCDC186
Protein Interactions : CTDCCDC186
Pharm GKB GenePA134904295
PharosQ7Z3E2
Clinical trialCCDC186
Miscellaneous
canSAR (ICR)CCDC186
HarmonizomeCCDC186
DataMed IndexCCDC186
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCCDC186
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:02:31 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.