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CCDC188 (coiled-coil domain containing 188)

Identity

Other alias-
HGNC (Hugo) CCDC188
LocusID (NCBI) 388849
Atlas_Id 77815
Location 22q11.21  [Link to chromosome band 22q11]
Location_base_pair Starts at 20136109 and ends at 20137431 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)CCDC188   51899
Cards
Entrez_Gene (NCBI)CCDC188  388849  coiled-coil domain containing 188
Aliases
GeneCards (Weizmann)CCDC188
Ensembl hg19 (Hinxton)ENSG00000234409 [Gene_View]  chr22:20136109-20137431 [Contig_View]  CCDC188 [Vega]
Ensembl hg38 (Hinxton)ENSG00000234409 [Gene_View]  chr22:20136109-20137431 [Contig_View]  CCDC188 [Vega]
ICGC DataPortalENSG00000234409
TCGA cBioPortalCCDC188
AceView (NCBI)CCDC188
Genatlas (Paris)CCDC188
WikiGenes388849
SOURCE (Princeton)CCDC188
Genetics Home Reference (NIH)CCDC188
Genomic and cartography
GoldenPath hg19 (UCSC)CCDC188  -     chr22:20136109-20137431 -  22q11.21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CCDC188  -     22q11.21   [Description]    (hg38-Dec_2013)
EnsemblCCDC188 - 22q11.21 [CytoView hg19]  CCDC188 - 22q11.21 [CytoView hg38]
Mapping of homologs : NCBICCDC188 [Mapview hg19]  CCDC188 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001243537
RefSeq genomic (Entrez)NC_000022 NC_018933 NG_021420 NT_011520 NW_004929429
Consensus coding sequences : CCDS (NCBI)CCDC188
Cluster EST : UnigeneHs.454905 [ NCBI ]
CGAP (NCI)Hs.454905
Alternative Splicing GalleryENSG00000234409
Gene ExpressionCCDC188 [ NCBI-GEO ]   CCDC188 [ EBI - ARRAY_EXPRESS ]   CCDC188 [ SEEK ]   CCDC188 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC188 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)388849
GTEX Portal (Tissue expression)CCDC188
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC188
DMDM Disease mutations388849
Blocks (Seattle)CCDC188
Human Protein AtlasENSG00000234409
Protein Interaction databases
FunCoupENSG00000234409
BioGRIDCCDC188
STRING (EMBL)CCDC188
ZODIACCCDC188
Ontologies - Pathways
Huge Navigator CCDC188 [HugePedia]
snp3D : Map Gene to Disease388849
BioCentury BCIQCCDC188
ClinGenCCDC188
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388849
Clinical trialCCDC188
Miscellaneous
canSAR (ICR)CCDC188 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC188
EVEXCCDC188
GoPubMedCCDC188
iHOPCCDC188
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:58:32 CET 2017

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