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CCDC190 (coiled-coil domain containing 190)

Identity

Alias_namesC1orf110
chromosome 1 open reading frame 110
Alias_symbol (synonym)MGC48998
Other alias
HGNC (Hugo) CCDC190
LocusID (NCBI) 339512
Atlas_Id 77817
Location 1q23.3  [Link to chromosome band 1q23]
Location_base_pair Starts at 162824087 and ends at 162838605 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
SDE2 (1q42.12) / CCDC190 (1q23.3)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)CCDC190   28736
Cards
Entrez_Gene (NCBI)CCDC190  339512  coiled-coil domain containing 190
AliasesC1orf110
GeneCards (Weizmann)CCDC190
Ensembl hg19 (Hinxton)ENSG00000185860 [Gene_View]  chr1:162824087-162838605 [Contig_View]  CCDC190 [Vega]
Ensembl hg38 (Hinxton)ENSG00000185860 [Gene_View]  chr1:162824087-162838605 [Contig_View]  CCDC190 [Vega]
ICGC DataPortalENSG00000185860
TCGA cBioPortalCCDC190
AceView (NCBI)CCDC190
Genatlas (Paris)CCDC190
WikiGenes339512
SOURCE (Princeton)CCDC190
Genetics Home Reference (NIH)CCDC190
Genomic and cartography
GoldenPath hg19 (UCSC)CCDC190  -     chr1:162824087-162838605 -  1q23.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CCDC190  -     1q23.3   [Description]    (hg38-Dec_2013)
EnsemblCCDC190 - 1q23.3 [CytoView hg19]  CCDC190 - 1q23.3 [CytoView hg38]
Mapping of homologs : NCBICCDC190 [Mapview hg19]  CCDC190 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_178550
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)CCDC190
Cluster EST : UnigeneHs.407631 [ NCBI ]
CGAP (NCI)Hs.407631
Alternative Splicing GalleryENSG00000185860
Gene ExpressionCCDC190 [ NCBI-GEO ]   CCDC190 [ EBI - ARRAY_EXPRESS ]   CCDC190 [ SEEK ]   CCDC190 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC190 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)339512
GTEX Portal (Tissue expression)CCDC190
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC190
DMDM Disease mutations339512
Blocks (Seattle)CCDC190
Human Protein AtlasENSG00000185860
HPRD14661
IPIIPI00244135   IPI00828155   IPI00640277   
Protein Interaction databases
FunCoupENSG00000185860
BioGRIDCCDC190
STRING (EMBL)CCDC190
ZODIACCCDC190
Ontologies - Pathways
Huge Navigator CCDC190 [HugePedia]
snp3D : Map Gene to Disease339512
BioCentury BCIQCCDC190
ClinGenCCDC190
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339512
Chemical/Pharm GKB GenePA142672494
Clinical trialCCDC190
Miscellaneous
canSAR (ICR)CCDC190 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC190
EVEXCCDC190
GoPubMedCCDC190
iHOPCCDC190
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:58:33 CET 2017

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