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CCDC191 (coiled-coil domain containing 191)

Identity

Alias_namesKIAA1407
KIAA1407
Other alias
HGNC (Hugo) CCDC191
LocusID (NCBI) 57577
Atlas_Id 77818
Location 3q13.31  [Link to chromosome band 3q13]
Location_base_pair Starts at 113964137 and ends at 114056613 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CCDC191 (3q13.31) / CCDC191 (3q13.31)MKRN2 (3p25.2) / CCDC191 (3q13.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC191   29272
Cards
Entrez_Gene (NCBI)CCDC191  57577  coiled-coil domain containing 191
AliasesKIAA1407
GeneCards (Weizmann)CCDC191
Ensembl hg19 (Hinxton)ENSG00000163617 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163617 [Gene_View]  chr3:113964137-114056613 [Contig_View]  CCDC191 [Vega]
ICGC DataPortalENSG00000163617
TCGA cBioPortalCCDC191
AceView (NCBI)CCDC191
Genatlas (Paris)CCDC191
WikiGenes57577
SOURCE (Princeton)CCDC191
Genetics Home Reference (NIH)CCDC191
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC191  -     chr3:113964137-114056613 -  3q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC191  -     3q13.31   [Description]    (hg19-Feb_2009)
EnsemblCCDC191 - 3q13.31 [CytoView hg19]  CCDC191 - 3q13.31 [CytoView hg38]
Mapping of homologs : NCBICCDC191 [Mapview hg19]  CCDC191 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB037828 AF509494 AK125304 AK295855 AK302488
RefSeq transcript (Entrez)NM_020817
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC191
Cluster EST : UnigeneHs.477159 [ NCBI ]
CGAP (NCI)Hs.477159
Alternative Splicing GalleryENSG00000163617
Gene ExpressionCCDC191 [ NCBI-GEO ]   CCDC191 [ EBI - ARRAY_EXPRESS ]   CCDC191 [ SEEK ]   CCDC191 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC191 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57577
GTEX Portal (Tissue expression)CCDC191
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NCU4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NCU4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NCU4
Splice isoforms : SwissVarQ8NCU4
PhosPhoSitePlusQ8NCU4
Domains : Interpro (EBI)CC191   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC191
DMDM Disease mutations57577
Blocks (Seattle)CCDC191
SuperfamilyQ8NCU4
Human Protein AtlasENSG00000163617
Peptide AtlasQ8NCU4
HPRD13856
IPIIPI00477003   IPI01012486   IPI00946822   IPI00947094   IPI00946630   IPI00946365   
Protein Interaction databases
DIP (DOE-UCLA)Q8NCU4
IntAct (EBI)Q8NCU4
FunCoupENSG00000163617
BioGRIDCCDC191
STRING (EMBL)CCDC191
ZODIACCCDC191
Ontologies - Pathways
QuickGOQ8NCU4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkCCDC191
Atlas of Cancer Signalling NetworkCCDC191
Wikipedia pathwaysCCDC191
Orthology - Evolution
OrthoDB57577
GeneTree (enSembl)ENSG00000163617
Phylogenetic Trees/Animal Genes : TreeFamCCDC191
HOVERGENQ8NCU4
HOGENOMQ8NCU4
Homologs : HomoloGeneCCDC191
Homology/Alignments : Family Browser (UCSC)CCDC191
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC191 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC191
dbVarCCDC191
ClinVarCCDC191
1000_GenomesCCDC191 
Exome Variant ServerCCDC191
ExAC (Exome Aggregation Consortium)CCDC191 (select the gene name)
Genetic variants : HAPMAP57577
Genomic Variants (DGV)CCDC191 [DGVbeta]
DECIPHERCCDC191 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC191 
Mutations
ICGC Data PortalCCDC191 
TCGA Data PortalCCDC191 
Broad Tumor PortalCCDC191
OASIS PortalCCDC191 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCCDC191
BioMutasearch CCDC191
DgiDB (Drug Gene Interaction Database)CCDC191
DoCM (Curated mutations)CCDC191 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC191 (select a term)
intoGenCCDC191
Cancer3DCCDC191(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCCDC191
Genetic Testing Registry CCDC191
NextProtQ8NCU4 [Medical]
TSGene57577
GENETestsCCDC191
Target ValidationCCDC191
Huge Navigator CCDC191 [HugePedia]
snp3D : Map Gene to Disease57577
BioCentury BCIQCCDC191
ClinGenCCDC191
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57577
Chemical/Pharm GKB GenePA134916748
Clinical trialCCDC191
Miscellaneous
canSAR (ICR)CCDC191 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC191
EVEXCCDC191
GoPubMedCCDC191
iHOPCCDC191
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:04:10 CEST 2017

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