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CCDC192 (coiled-coil domain containing 192)

Identity

Alias_namesLINC01183
long intergenic non-protein coding RNA 1183
coiled-coil domain containing
Other alias
HGNC (Hugo) CCDC192
LocusID (NCBI) 728586
Atlas_Id 77819
Location 5q23.2  [Link to chromosome band 5q23]
Location_base_pair Starts at 127039081 and ends at 127277208 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)CCDC192   49566
Cards
Entrez_Gene (NCBI)CCDC192  728586  coiled-coil domain containing 192
AliasesLINC01183
GeneCards (Weizmann)CCDC192
Ensembl hg19 (Hinxton)ENSG00000230561 [Gene_View]  chr5:127039081-127277208 [Contig_View]  CCDC192 [Vega]
Ensembl hg38 (Hinxton)ENSG00000230561 [Gene_View]  chr5:127039081-127277208 [Contig_View]  CCDC192 [Vega]
ICGC DataPortalENSG00000230561
TCGA cBioPortalCCDC192
AceView (NCBI)CCDC192
Genatlas (Paris)CCDC192
WikiGenes728586
SOURCE (Princeton)CCDC192
Genetics Home Reference (NIH)CCDC192
Genomic and cartography
GoldenPath hg19 (UCSC)CCDC192  -     chr5:127039081-127277208 +  5q23.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CCDC192  -     5q23.2   [Description]    (hg38-Dec_2013)
EnsemblCCDC192 - 5q23.2 [CytoView hg19]  CCDC192 - 5q23.2 [CytoView hg38]
Mapping of homologs : NCBICCDC192 [Mapview hg19]  CCDC192 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001317938
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929323
Consensus coding sequences : CCDS (NCBI)CCDC192
Cluster EST : UnigeneHs.582532 [ NCBI ]
CGAP (NCI)Hs.582532
Alternative Splicing GalleryENSG00000230561
Gene ExpressionCCDC192 [ NCBI-GEO ]   CCDC192 [ EBI - ARRAY_EXPRESS ]   CCDC192 [ SEEK ]   CCDC192 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC192 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728586
GTEX Portal (Tissue expression)CCDC192
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC192
DMDM Disease mutations728586
Blocks (Seattle)CCDC192
Human Protein AtlasENSG00000230561
Protein Interaction databases
FunCoupENSG00000230561
BioGRIDCCDC192
STRING (EMBL)CCDC192
ZODIACCCDC192
Ontologies - Pathways
Huge Navigator CCDC192 [HugePedia]
snp3D : Map Gene to Disease728586
BioCentury BCIQCCDC192
ClinGenCCDC192
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728586
Clinical trialCCDC192
Miscellaneous
canSAR (ICR)CCDC192 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC192
EVEXCCDC192
GoPubMedCCDC192
iHOPCCDC192
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 11:58:33 CET 2017

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