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CCDC32 (coiled-coil domain containing 32)

Identity

Alias_namesC15orf57
chromosome 15 open reading frame 57
Alias_symbol (synonym)MGC20481
Other alias
HGNC (Hugo) CCDC32
LocusID (NCBI) 90416
Atlas_Id 80032
Location 15q15.1  [Link to chromosome band 15q15]
Location_base_pair Starts at 40552913 and ends at 40565057 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)CCDC32   28295
Cards
Entrez_Gene (NCBI)CCDC32  90416  coiled-coil domain containing 32
AliasesC15orf57
GeneCards (Weizmann)CCDC32
Ensembl hg19 (Hinxton)ENSG00000128891 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000128891 [Gene_View]  chr15:40552913-40565057 [Contig_View]  CCDC32 [Vega]
ICGC DataPortalENSG00000128891
TCGA cBioPortalCCDC32
AceView (NCBI)CCDC32
Genatlas (Paris)CCDC32
WikiGenes90416
SOURCE (Princeton)CCDC32
Genetics Home Reference (NIH)CCDC32
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC32  -     chr15:40552913-40565057 -  15q15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC32  -     15q15.1   [Description]    (hg19-Feb_2009)
EnsemblCCDC32 - 15q15.1 [CytoView hg19]  CCDC32 - 15q15.1 [CytoView hg38]
Mapping of homologs : NCBICCDC32 [Mapview hg19]  CCDC32 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092214 AK098781 AK293079 AK312842 AL832032
RefSeq transcript (Entrez)NM_001080791 NM_001080792 NM_001289132 NM_052849
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC32
Cluster EST : UnigeneHs.654661 [ NCBI ]
CGAP (NCI)Hs.654661
Alternative Splicing GalleryENSG00000128891
Gene ExpressionCCDC32 [ NCBI-GEO ]   CCDC32 [ EBI - ARRAY_EXPRESS ]   CCDC32 [ SEEK ]   CCDC32 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC32 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90416
GTEX Portal (Tissue expression)CCDC32
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BV29   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BV29  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BV29
Splice isoforms : SwissVarQ9BV29
PhosPhoSitePlusQ9BV29
Domains : Interpro (EBI)CCDC32   
Domain families : Pfam (Sanger)CCDC32 (PF14989)   
Domain families : Pfam (NCBI)pfam14989   
Conserved Domain (NCBI)CCDC32
DMDM Disease mutations90416
Blocks (Seattle)CCDC32
SuperfamilyQ9BV29
Human Protein AtlasENSG00000128891
Peptide AtlasQ9BV29
IPIIPI00402007   IPI00478351   IPI00794516   
Protein Interaction databases
DIP (DOE-UCLA)Q9BV29
IntAct (EBI)Q9BV29
FunCoupENSG00000128891
BioGRIDCCDC32
STRING (EMBL)CCDC32
ZODIACCCDC32
Ontologies - Pathways
QuickGOQ9BV29
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkCCDC32
Atlas of Cancer Signalling NetworkCCDC32
Wikipedia pathwaysCCDC32
Orthology - Evolution
OrthoDB90416
GeneTree (enSembl)ENSG00000128891
Phylogenetic Trees/Animal Genes : TreeFamCCDC32
HOVERGENQ9BV29
HOGENOMQ9BV29
Homologs : HomoloGeneCCDC32
Homology/Alignments : Family Browser (UCSC)CCDC32
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC32 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC32
dbVarCCDC32
ClinVarCCDC32
1000_GenomesCCDC32 
Exome Variant ServerCCDC32
ExAC (Exome Aggregation Consortium)CCDC32 (select the gene name)
Genetic variants : HAPMAP90416
Genomic Variants (DGV)CCDC32 [DGVbeta]
DECIPHERCCDC32 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC32 
Mutations
ICGC Data PortalCCDC32 
TCGA Data PortalCCDC32 
Broad Tumor PortalCCDC32
OASIS PortalCCDC32 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCCDC32
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCDC32
DgiDB (Drug Gene Interaction Database)CCDC32
DoCM (Curated mutations)CCDC32 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC32 (select a term)
intoGenCCDC32
Cancer3DCCDC32(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCCDC32
Genetic Testing Registry CCDC32
NextProtQ9BV29 [Medical]
TSGene90416
GENETestsCCDC32
Target ValidationCCDC32
Huge Navigator CCDC32 [HugePedia]
snp3D : Map Gene to Disease90416
BioCentury BCIQCCDC32
ClinGenCCDC32
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90416
Chemical/Pharm GKB GenePA162378234
Clinical trialCCDC32
Miscellaneous
canSAR (ICR)CCDC32 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC32
EVEXCCDC32
GoPubMedCCDC32
iHOPCCDC32
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:04:12 CEST 2017

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