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CCDC63 (coiled-coil domain containing 63)

Identity

Alias_symbol (synonym)ODA5
FLJ35843
Other alias
HGNC (Hugo) CCDC63
LocusID (NCBI) 160762
Atlas_Id 61555
Location 12q24.11  [Link to chromosome band 12q24]
Location_base_pair Starts at 110846960 and ends at 110907535 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC63   26669
Cards
Entrez_Gene (NCBI)CCDC63  160762  coiled-coil domain containing 63
AliasesODA5
GeneCards (Weizmann)CCDC63
Ensembl hg19 (Hinxton)ENSG00000173093 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000173093 [Gene_View]  chr12:110846960-110907535 [Contig_View]  CCDC63 [Vega]
ICGC DataPortalENSG00000173093
TCGA cBioPortalCCDC63
AceView (NCBI)CCDC63
Genatlas (Paris)CCDC63
WikiGenes160762
SOURCE (Princeton)CCDC63
Genetics Home Reference (NIH)CCDC63
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC63  -     chr12:110846960-110907535 +  12q24.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC63  -     12q24.11   [Description]    (hg19-Feb_2009)
EnsemblCCDC63 - 12q24.11 [CytoView hg19]  CCDC63 - 12q24.11 [CytoView hg38]
Mapping of homologs : NCBICCDC63 [Mapview hg19]  CCDC63 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093162 AK302207 AK310294 BC044815 BC064580
RefSeq transcript (Entrez)NM_001286243 NM_001286244 NM_152591
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC63
Cluster EST : UnigeneHs.437141 [ NCBI ]
CGAP (NCI)Hs.437141
Alternative Splicing GalleryENSG00000173093
Gene ExpressionCCDC63 [ NCBI-GEO ]   CCDC63 [ EBI - ARRAY_EXPRESS ]   CCDC63 [ SEEK ]   CCDC63 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC63 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)160762
GTEX Portal (Tissue expression)CCDC63
Human Protein AtlasENSG00000173093-CCDC63 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NA47   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NA47  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NA47
Splice isoforms : SwissVarQ8NA47
PhosPhoSitePlusQ8NA47
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC63
DMDM Disease mutations160762
Blocks (Seattle)CCDC63
SuperfamilyQ8NA47
Human Protein Atlas [tissue]ENSG00000173093-CCDC63 [tissue]
Peptide AtlasQ8NA47
HPRD08765
IPIIPI00167904   IPI01013248   IPI01021888   
Protein Interaction databases
DIP (DOE-UCLA)Q8NA47
IntAct (EBI)Q8NA47
FunCoupENSG00000173093
BioGRIDCCDC63
STRING (EMBL)CCDC63
ZODIACCCDC63
Ontologies - Pathways
QuickGOQ8NA47
Ontology : AmiGOcilium movement  axoneme  spermatid development  outer dynein arm assembly  
Ontology : EGO-EBIcilium movement  axoneme  spermatid development  outer dynein arm assembly  
NDEx NetworkCCDC63
Atlas of Cancer Signalling NetworkCCDC63
Wikipedia pathwaysCCDC63
Orthology - Evolution
OrthoDB160762
GeneTree (enSembl)ENSG00000173093
Phylogenetic Trees/Animal Genes : TreeFamCCDC63
HOVERGENQ8NA47
HOGENOMQ8NA47
Homologs : HomoloGeneCCDC63
Homology/Alignments : Family Browser (UCSC)CCDC63
Gene fusions - Rearrangements
Tumor Fusion PortalCCDC63
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC63 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC63
dbVarCCDC63
ClinVarCCDC63
1000_GenomesCCDC63 
Exome Variant ServerCCDC63
ExAC (Exome Aggregation Consortium)ENSG00000173093
GNOMAD BrowserENSG00000173093
Genetic variants : HAPMAP160762
Genomic Variants (DGV)CCDC63 [DGVbeta]
DECIPHERCCDC63 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC63 
Mutations
ICGC Data PortalCCDC63 
TCGA Data PortalCCDC63 
Broad Tumor PortalCCDC63
OASIS PortalCCDC63 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCDC63  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCDC63
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCDC63
DgiDB (Drug Gene Interaction Database)CCDC63
DoCM (Curated mutations)CCDC63 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC63 (select a term)
intoGenCCDC63
Cancer3DCCDC63(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETCCDC63
MedgenCCDC63
Genetic Testing Registry CCDC63
NextProtQ8NA47 [Medical]
TSGene160762
GENETestsCCDC63
Target ValidationCCDC63
Huge Navigator CCDC63 [HugePedia]
snp3D : Map Gene to Disease160762
BioCentury BCIQCCDC63
ClinGenCCDC63
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD160762
Chemical/Pharm GKB GenePA143485415
Clinical trialCCDC63
Miscellaneous
canSAR (ICR)CCDC63 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC63
EVEXCCDC63
GoPubMedCCDC63
iHOPCCDC63
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:25:56 CET 2017

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