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CCDC66 (coiled-coil domain containing 66)

Identity

Other alias-
HGNC (Hugo) CCDC66
LocusID (NCBI) 285331
Atlas_Id 57141
Location 3p14.3  [Link to chromosome band 3p14]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CCDC66 (3p14.3) / FLNB (3p14.3)CCDC66 (3p14.3) / LOC401082 ()CCDC66 (3p14.3) / NDUFB5 (3q26.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCDC66   27709
Cards
Entrez_Gene (NCBI)CCDC66  285331  coiled-coil domain containing 66
Aliases
GeneCards (Weizmann)CCDC66
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  CCDC66 [Vega]
TCGA cBioPortalCCDC66
AceView (NCBI)CCDC66
Genatlas (Paris)CCDC66
WikiGenes285331
SOURCE (Princeton)CCDC66
Genetics Home Reference (NIH)CCDC66
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC66  -  
GoldenPath hg19 (UCSC)CCDC66  -  
EnsemblCCDC66 - [CytoView hg19]  CCDC66 - [CytoView hg38]
Mapping of homologs : NCBICCDC66 [Mapview hg19]  CCDC66 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA887479 AK095688 AK096754 AK125303 AL832556
RefSeq transcript (Entrez)NM_001012506 NM_001141947 NM_001353147 NM_001353148 NM_001353149 NM_001353150 NM_001353151 NM_001353152 NM_001353153 NM_001353154 NM_001353155 NM_001353156 NM_001353158 NM_001353160
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCDC66
Cluster EST : UnigeneHs.476399 [ NCBI ]
CGAP (NCI)Hs.476399
Gene ExpressionCCDC66 [ NCBI-GEO ]   CCDC66 [ EBI - ARRAY_EXPRESS ]   CCDC66 [ SEEK ]   CCDC66 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC66 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285331
GTEX Portal (Tissue expression)CCDC66
Protein : pattern, domain, 3D structure
UniProt/SwissProtA2RUB6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA2RUB6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA2RUB6
Splice isoforms : SwissVarA2RUB6
PhosPhoSitePlusA2RUB6
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC66
DMDM Disease mutations285331
Blocks (Seattle)CCDC66
SuperfamilyA2RUB6
Peptide AtlasA2RUB6
IPIIPI00178568   IPI00884155   IPI00915755   IPI00797197   IPI00927406   IPI00924910   IPI00925316   IPI01011687   IPI01011255   
Protein Interaction databases
DIP (DOE-UCLA)A2RUB6
IntAct (EBI)A2RUB6
BioGRIDCCDC66
STRING (EMBL)CCDC66
ZODIACCCDC66
Ontologies - Pathways
QuickGOA2RUB6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkCCDC66
Atlas of Cancer Signalling NetworkCCDC66
Wikipedia pathwaysCCDC66
Orthology - Evolution
OrthoDB285331
Phylogenetic Trees/Animal Genes : TreeFamCCDC66
HOVERGENA2RUB6
HOGENOMA2RUB6
Homologs : HomoloGeneCCDC66
Homology/Alignments : Family Browser (UCSC)CCDC66
Gene fusions - Rearrangements
Fusion: Tumor Portal CCDC66
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC66 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC66
dbVarCCDC66
ClinVarCCDC66
1000_GenomesCCDC66 
Exome Variant ServerCCDC66
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP285331
Genomic Variants (DGV)CCDC66 [DGVbeta]
DECIPHERCCDC66 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC66 
Mutations
ICGC Data PortalCCDC66 
TCGA Data PortalCCDC66 
Broad Tumor PortalCCDC66
OASIS PortalCCDC66 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCDC66  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCDC66
BioMutasearch CCDC66
DgiDB (Drug Gene Interaction Database)CCDC66
DoCM (Curated mutations)CCDC66 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCDC66 (select a term)
intoGenCCDC66
Cancer3DCCDC66(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCCDC66
Genetic Testing Registry CCDC66
NextProtA2RUB6 [Medical]
TSGene285331
GENETestsCCDC66
Target ValidationCCDC66
Huge Navigator CCDC66 [HugePedia]
snp3D : Map Gene to Disease285331
BioCentury BCIQCCDC66
ClinGenCCDC66
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285331
Chemical/Pharm GKB GenePA143485418
Clinical trialCCDC66
Miscellaneous
canSAR (ICR)CCDC66 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCDC66
EVEXCCDC66
GoPubMedCCDC66
iHOPCCDC66
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:43:23 CET 2017

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