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CCDC91 (coiled-coil domain containing 91)

Identity

Alias (NCBI)HSD8
p56
HGNC (Hugo) CCDC91
HGNC Alias symbp56
FLJ11088
DKFZp779L1558
HGNC Alias nameGGA binding partner
LocusID (NCBI) 55297
Atlas_Id 61578
Location 12p11.22  [Link to chromosome band 12p11]
Location_base_pair Starts at 28190456 and ends at 28550166 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
APP (21q21.3) / CCDC91 (12p11.22)BICD1 (12p11.21) / CCDC91 (12p11.22)CCDC91 (12p11.22) / CRTC3 (15q26.1)
CCDC91 (12p11.22) / FAR2 (12p11.22)CCDC91 (12p11.22) / FRY (13q13.1)CCDC91 (12p11.22) / LYRM5 (12p12.1)
CCDC91 (12p11.22) / NTSR1 (20q13.33)CCDC91 (12p11.22) / PDZRN4 (12q12)HSP90AA1 (14q32.31) / CCDC91 (12p11.22)
ITPR2 (12p12.1) / CCDC91 (12p11.22)PCDH9 (13q21.32) / CCDC91 (12p11.22)CCDC91 LYRM5
CCDC91 FAR2CCDC91 NTSR1CCDC91 PDZRN4

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CCDC91   24855
Cards
Entrez_Gene (NCBI)CCDC91    coiled-coil domain containing 91
AliasesHSD8; p56
GeneCards (Weizmann)CCDC91
Ensembl hg19 (Hinxton)ENSG00000123106 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000123106 [Gene_View]  ENSG00000123106 [Sequence]  chr12:28190456-28550166 [Contig_View]  CCDC91 [Vega]
ICGC DataPortalENSG00000123106
TCGA cBioPortalCCDC91
AceView (NCBI)CCDC91
Genatlas (Paris)CCDC91
SOURCE (Princeton)CCDC91
Genetics Home Reference (NIH)CCDC91
Genomic and cartography
GoldenPath hg38 (UCSC)CCDC91  -     chr12:28190456-28550166 +  12p11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCDC91  -     12p11.22   [Description]    (hg19-Feb_2009)
GoldenPathCCDC91 - 12p11.22 [CytoView hg19]  CCDC91 - 12p11.22 [CytoView hg38]
ImmunoBaseENSG00000123106
Genome Data Viewer NCBICCDC91 [Mapview hg19]  
OMIM617366   
Gene and transcription
Genbank (Entrez)AK001950 AK093152 AK309181 AL570537 AY251168
RefSeq transcript (Entrez)NM_001330367 NM_001352078 NM_001352079 NM_001352080 NM_001352081 NM_001352082 NM_001352083 NM_001352084 NM_001352086 NM_001352087 NM_001387000 NM_018318
Consensus coding sequences : CCDS (NCBI)CCDC91
Gene ExpressionCCDC91 [ NCBI-GEO ]   CCDC91 [ EBI - ARRAY_EXPRESS ]   CCDC91 [ SEEK ]   CCDC91 [ MEM ]
Gene Expression Viewer (FireBrowse)CCDC91 [ Firebrowse - Broad ]
GenevisibleExpression of CCDC91 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55297
GTEX Portal (Tissue expression)CCDC91
Human Protein AtlasENSG00000123106-CCDC91 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z6B0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z6B0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z6B0
PhosPhoSitePlusQ7Z6B0
Domains : Interpro (EBI)CCDC91   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCDC91
PDB (RSDB)1OM9   
PDB Europe1OM9   
PDB (PDBSum)1OM9   
PDB (IMB)1OM9   
Structural Biology KnowledgeBase1OM9   
SCOP (Structural Classification of Proteins)1OM9   
CATH (Classification of proteins structures)1OM9   
SuperfamilyQ7Z6B0
AlphaFold pdb e-kbQ7Z6B0   
Human Protein Atlas [tissue]ENSG00000123106-CCDC91 [tissue]
HPRD16905
Protein Interaction databases
DIP (DOE-UCLA)Q7Z6B0
IntAct (EBI)Q7Z6B0
BioGRIDCCDC91
STRING (EMBL)CCDC91
ZODIACCCDC91
Ontologies - Pathways
QuickGOQ7Z6B0
Ontology : AmiGOnucleoplasm  Golgi apparatus  trans-Golgi network  trans-Golgi network  cytosol  protein transport  membrane  Golgi to lysosome transport  Golgi to lysosome transport  
Ontology : EGO-EBInucleoplasm  Golgi apparatus  trans-Golgi network  trans-Golgi network  cytosol  protein transport  membrane  Golgi to lysosome transport  Golgi to lysosome transport  
NDEx NetworkCCDC91
Atlas of Cancer Signalling NetworkCCDC91
Wikipedia pathwaysCCDC91
Orthology - Evolution
OrthoDB55297
GeneTree (enSembl)ENSG00000123106
Phylogenetic Trees/Animal Genes : TreeFamCCDC91
Homologs : HomoloGeneCCDC91
Homology/Alignments : Family Browser (UCSC)CCDC91
Gene fusions - Rearrangements
Fusion : QuiverCCDC91
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCDC91 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCDC91
dbVarCCDC91
ClinVarCCDC91
MonarchCCDC91
1000_GenomesCCDC91 
Exome Variant ServerCCDC91
GNOMAD BrowserENSG00000123106
Varsome BrowserCCDC91
ACMGCCDC91 variants
VarityQ7Z6B0
Genomic Variants (DGV)CCDC91 [DGVbeta]
DECIPHERCCDC91 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCDC91 
Mutations
ICGC Data PortalCCDC91 
TCGA Data PortalCCDC91 
Broad Tumor PortalCCDC91
OASIS PortalCCDC91 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCDC91  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCCDC91
Mutations and Diseases : HGMDCCDC91
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCCDC91
DgiDB (Drug Gene Interaction Database)CCDC91
DoCM (Curated mutations)CCDC91
CIViC (Clinical Interpretations of Variants in Cancer)CCDC91
Cancer3DCCDC91
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617366   
Orphanet
DisGeNETCCDC91
MedgenCCDC91
Genetic Testing Registry CCDC91
NextProtQ7Z6B0 [Medical]
GENETestsCCDC91
Target ValidationCCDC91
Huge Navigator CCDC91 [HugePedia]
ClinGenCCDC91
Clinical trials, drugs, therapy
MyCancerGenomeCCDC91
Protein Interactions : CTDCCDC91
Pharm GKB GenePA144596458
PharosQ7Z6B0
Clinical trialCCDC91
Miscellaneous
canSAR (ICR)CCDC91
HarmonizomeCCDC91
DataMed IndexCCDC91
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCCDC91
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:45:21 CEST 2021

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