Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CCEPR (cervical carcinoma expressed PCNA regulatory lncRNA)

Identity

Alias (NCBI)CCHE1
lncRNA-CCHE1
HGNC (Hugo) CCEPR
HGNC Alias symbCCHE1
HGNC Alias namecervical carcinoma high-expressed lncRNA 1
LocusID (NCBI) 105682749
Atlas_Id 55546
Location 10q21.1  [Link to chromosome band 10q21]
Location_base_pair Starts at 59173963 and ends at 59176464 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)CCEPR   51693
Cards
Entrez_Gene (NCBI)CCEPR    cervical carcinoma expressed PCNA regulatory lncRNA
AliasesCCHE1; lncRNA-CCHE1
GeneCards (Weizmann)CCEPR
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:59173963-59176464 [Contig_View]  CCEPR [Vega]
TCGA cBioPortalCCEPR
AceView (NCBI)CCEPR
Genatlas (Paris)CCEPR
SOURCE (Princeton)CCEPR
Genetics Home Reference (NIH)CCEPR
Genomic and cartography
GoldenPath hg38 (UCSC)CCEPR  -     chr10:59173963-59176464 -  10q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCEPR  -     10q21.1   [Description]    (hg19-Feb_2009)
GoldenPathCCEPR - 10q21.1 [CytoView hg19]  CCEPR - 10q21.1 [CytoView hg38]
Genome Data Viewer NCBICCEPR [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA444164 AI697649 AK055418 AL520914 BQ010996
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)CCEPR
Gene ExpressionCCEPR [ NCBI-GEO ]   CCEPR [ EBI - ARRAY_EXPRESS ]   CCEPR [ SEEK ]   CCEPR [ MEM ]
Gene Expression Viewer (FireBrowse)CCEPR [ Firebrowse - Broad ]
GenevisibleExpression of CCEPR in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105682749
GTEX Portal (Tissue expression)CCEPR
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCEPR
Protein Interaction databases
BioGRIDCCEPR
STRING (EMBL)CCEPR
ZODIACCCEPR
Ontologies - Pathways
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCCEPR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:02:36 CEST 2021

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