Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CCEPR (cervical carcinoma expressed PCNA regulatory lncRNA)

Identity

Alias_symbol (synonym)CCHE1
Other aliaslncRNA-CCHE1
HGNC (Hugo) CCEPR
LocusID (NCBI) 105682749
Atlas_Id 55546
Location 10q21.1  [Link to chromosome band 10q21]
Location_base_pair Starts at 59173963 and ends at 59176464 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCEPR   51693
Cards
Entrez_Gene (NCBI)CCEPR  105682749  cervical carcinoma expressed PCNA regulatory lncRNA
AliasesCCHE1; lncRNA-CCHE1
GeneCards (Weizmann)CCEPR
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:59173963-59176464 [Contig_View]  CCEPR [Vega]
TCGA cBioPortalCCEPR
AceView (NCBI)CCEPR
Genatlas (Paris)CCEPR
WikiGenes105682749
SOURCE (Princeton)CCEPR
Genetics Home Reference (NIH)CCEPR
Genomic and cartography
GoldenPath hg38 (UCSC)CCEPR  -     chr10:59173963-59176464 -  10q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCEPR  -     10q21.1   [Description]    (hg19-Feb_2009)
EnsemblCCEPR - 10q21.1 [CytoView hg19]  CCEPR - 10q21.1 [CytoView hg38]
Mapping of homologs : NCBICCEPR [Mapview hg19]  CCEPR [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA444164 AI697649 AK055418 AL520914 BQ010996
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCEPR
Cluster EST : UnigeneHs.619424 [ NCBI ]
CGAP (NCI)Hs.619424
Gene ExpressionCCEPR [ NCBI-GEO ]   CCEPR [ EBI - ARRAY_EXPRESS ]   CCEPR [ SEEK ]   CCEPR [ MEM ]
Gene Expression Viewer (FireBrowse)CCEPR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105682749
GTEX Portal (Tissue expression)CCEPR
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCEPR
DMDM Disease mutations105682749
Blocks (Seattle)CCEPR
Protein Interaction databases
BioGRIDCCEPR
STRING (EMBL)CCEPR
ZODIACCCEPR
Ontologies - Pathways
Huge Navigator CCEPR [HugePedia]
snp3D : Map Gene to Disease105682749
BioCentury BCIQCCEPR
ClinGenCCEPR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105682749
Clinical trialCCEPR
Miscellaneous
canSAR (ICR)CCEPR (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCEPR
EVEXCCEPR
GoPubMedCCEPR
iHOPCCEPR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 10:56:14 CET 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.