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CCNDBP1 (cyclin D1 binding protein 1)

Identity

Alias_namescyclin D-type binding-protein 1
Alias_symbol (synonym)DIP1
GCIP
HHM
Other alias
HGNC (Hugo) CCNDBP1
LocusID (NCBI) 23582
Atlas_Id 45933
Location 15q15.2  [Link to chromosome band 15q15]
Location_base_pair Starts at 43185268 and ends at 43197177 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CCNDBP1 (15q15.2) / AMZ2 (17q24.2)FAM214A (15q21.2) / CCNDBP1 (15q15.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCNDBP1   1587
Cards
Entrez_Gene (NCBI)CCNDBP1  23582  cyclin D1 binding protein 1
AliasesDIP1; GCIP; HHM
GeneCards (Weizmann)CCNDBP1
Ensembl hg19 (Hinxton)ENSG00000166946 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166946 [Gene_View]  chr15:43185268-43197177 [Contig_View]  CCNDBP1 [Vega]
ICGC DataPortalENSG00000166946
TCGA cBioPortalCCNDBP1
AceView (NCBI)CCNDBP1
Genatlas (Paris)CCNDBP1
WikiGenes23582
SOURCE (Princeton)CCNDBP1
Genetics Home Reference (NIH)CCNDBP1
Genomic and cartography
GoldenPath hg38 (UCSC)CCNDBP1  -     chr15:43185268-43197177 +  15q15.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCNDBP1  -     15q15.2   [Description]    (hg19-Feb_2009)
EnsemblCCNDBP1 - 15q15.2 [CytoView hg19]  CCNDBP1 - 15q15.2 [CytoView hg38]
Mapping of homologs : NCBICCNDBP1 [Mapview hg19]  CCNDBP1 [Mapview hg38]
OMIM607089   
Gene and transcription
Genbank (Entrez)AF082569 AF087852 AF113535 AF132034 AF246144
RefSeq transcript (Entrez)NM_012142 NM_037370
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCNDBP1
Cluster EST : UnigeneHs.36794 [ NCBI ]
CGAP (NCI)Hs.36794
Alternative Splicing GalleryENSG00000166946
Gene ExpressionCCNDBP1 [ NCBI-GEO ]   CCNDBP1 [ EBI - ARRAY_EXPRESS ]   CCNDBP1 [ SEEK ]   CCNDBP1 [ MEM ]
Gene Expression Viewer (FireBrowse)CCNDBP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23582
GTEX Portal (Tissue expression)CCNDBP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95273   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95273  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95273
Splice isoforms : SwissVarO95273
PhosPhoSitePlusO95273
Domains : Interpro (EBI)CCNDBP1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCNDBP1
DMDM Disease mutations23582
Blocks (Seattle)CCNDBP1
PDB (SRS)3AY5   
PDB (PDBSum)3AY5   
PDB (IMB)3AY5   
PDB (RSDB)3AY5   
Structural Biology KnowledgeBase3AY5   
SCOP (Structural Classification of Proteins)3AY5   
CATH (Classification of proteins structures)3AY5   
SuperfamilyO95273
Human Protein AtlasENSG00000166946
Peptide AtlasO95273
HPRD06156
IPIIPI00015923   IPI00888907   IPI00074484   IPI00443382   IPI01015864   
Protein Interaction databases
DIP (DOE-UCLA)O95273
IntAct (EBI)O95273
FunCoupENSG00000166946
BioGRIDCCNDBP1
STRING (EMBL)CCNDBP1
ZODIACCCNDBP1
Ontologies - Pathways
QuickGOO95273
Ontology : AmiGOprotein binding  nucleus  nucleoplasm  cytoplasm  cell cycle  regulation of cell cycle  
Ontology : EGO-EBIprotein binding  nucleus  nucleoplasm  cytoplasm  cell cycle  regulation of cell cycle  
NDEx NetworkCCNDBP1
Atlas of Cancer Signalling NetworkCCNDBP1
Wikipedia pathwaysCCNDBP1
Orthology - Evolution
OrthoDB23582
GeneTree (enSembl)ENSG00000166946
Phylogenetic Trees/Animal Genes : TreeFamCCNDBP1
HOVERGENO95273
HOGENOMO95273
Homologs : HomoloGeneCCNDBP1
Homology/Alignments : Family Browser (UCSC)CCNDBP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCNDBP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCNDBP1
dbVarCCNDBP1
ClinVarCCNDBP1
1000_GenomesCCNDBP1 
Exome Variant ServerCCNDBP1
ExAC (Exome Aggregation Consortium)CCNDBP1 (select the gene name)
Genetic variants : HAPMAP23582
Genomic Variants (DGV)CCNDBP1 [DGVbeta]
DECIPHERCCNDBP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCNDBP1 
Mutations
ICGC Data PortalCCNDBP1 
TCGA Data PortalCCNDBP1 
Broad Tumor PortalCCNDBP1
OASIS PortalCCNDBP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCNDBP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCNDBP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCNDBP1
DgiDB (Drug Gene Interaction Database)CCNDBP1
DoCM (Curated mutations)CCNDBP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCNDBP1 (select a term)
intoGenCCNDBP1
Cancer3DCCNDBP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607089   
Orphanet
MedgenCCNDBP1
Genetic Testing Registry CCNDBP1
NextProtO95273 [Medical]
TSGene23582
GENETestsCCNDBP1
Target ValidationCCNDBP1
Huge Navigator CCNDBP1 [HugePedia]
snp3D : Map Gene to Disease23582
BioCentury BCIQCCNDBP1
ClinGenCCNDBP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23582
Chemical/Pharm GKB GenePA26154
Clinical trialCCNDBP1
Miscellaneous
canSAR (ICR)CCNDBP1 (select the gene name)
Probes
Litterature
PubMed37 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCNDBP1
EVEXCCNDBP1
GoPubMedCCNDBP1
iHOPCCNDBP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:27:11 CEST 2017

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