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CCNG1 (cyclin G1)

Identity

Alias_namesCCNG
Other alias
HGNC (Hugo) CCNG1
LocusID (NCBI) 900
Atlas_Id 959
Location 5q34  [Link to chromosome band 5q34]
Location_base_pair Starts at 163437571 and ends at 163445016 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CCNG1 (5q34) / CCNG1 (5q34)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCNG1   1592
Cards
Entrez_Gene (NCBI)CCNG1  900  cyclin G1
AliasesCCNG
GeneCards (Weizmann)CCNG1
Ensembl hg19 (Hinxton)ENSG00000113328 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000113328 [Gene_View]  chr5:163437571-163445016 [Contig_View]  CCNG1 [Vega]
ICGC DataPortalENSG00000113328
TCGA cBioPortalCCNG1
AceView (NCBI)CCNG1
Genatlas (Paris)CCNG1
WikiGenes900
SOURCE (Princeton)CCNG1
Genetics Home Reference (NIH)CCNG1
Genomic and cartography
GoldenPath hg38 (UCSC)CCNG1  -     chr5:163437571-163445016 +  5q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCNG1  -     5q34   [Description]    (hg19-Feb_2009)
EnsemblCCNG1 - 5q34 [CytoView hg19]  CCNG1 - 5q34 [CytoView hg38]
Mapping of homologs : NCBICCNG1 [Mapview hg19]  CCNG1 [Mapview hg38]
OMIM601578   
Gene and transcription
Genbank (Entrez)AK297190 AK312913 AK316234 BC000196 BC007093
RefSeq transcript (Entrez)NM_004060 NM_199246
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCNG1
Cluster EST : UnigeneHs.79101 [ NCBI ]
CGAP (NCI)Hs.79101
Alternative Splicing GalleryENSG00000113328
Gene ExpressionCCNG1 [ NCBI-GEO ]   CCNG1 [ EBI - ARRAY_EXPRESS ]   CCNG1 [ SEEK ]   CCNG1 [ MEM ]
Gene Expression Viewer (FireBrowse)CCNG1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)900
GTEX Portal (Tissue expression)CCNG1
Human Protein AtlasENSG00000113328-CCNG1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP51959   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP51959  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP51959
Splice isoforms : SwissVarP51959
PhosPhoSitePlusP51959
Domains : Interpro (EBI)CCNG1    Cyclin-like    Cyclin_N   
Domain families : Pfam (Sanger)Cyclin_N (PF00134)   
Domain families : Pfam (NCBI)pfam00134   
Domain families : Smart (EMBL)CYCLIN (SM00385)  
Conserved Domain (NCBI)CCNG1
DMDM Disease mutations900
Blocks (Seattle)CCNG1
SuperfamilyP51959
Human Protein Atlas [tissue]ENSG00000113328-CCNG1 [tissue]
Peptide AtlasP51959
HPRD03345
IPIIPI00021335   IPI00384958   IPI00964759   IPI00964507   IPI00965210   IPI00964169   IPI00964494   
Protein Interaction databases
DIP (DOE-UCLA)P51959
IntAct (EBI)P51959
FunCoupENSG00000113328
BioGRIDCCNG1
STRING (EMBL)CCNG1
ZODIACCCNG1
Ontologies - Pathways
QuickGOP51959
Ontology : AmiGOregulation of cyclin-dependent protein serine/threonine kinase activity  protein binding  nucleoplasm  cell cycle  cell division  
Ontology : EGO-EBIregulation of cyclin-dependent protein serine/threonine kinase activity  protein binding  nucleoplasm  cell cycle  cell division  
Pathways : KEGGp53 signaling pathway    MicroRNAs in cancer   
NDEx NetworkCCNG1
Atlas of Cancer Signalling NetworkCCNG1
Wikipedia pathwaysCCNG1
Orthology - Evolution
OrthoDB900
GeneTree (enSembl)ENSG00000113328
Phylogenetic Trees/Animal Genes : TreeFamCCNG1
HOVERGENP51959
HOGENOMP51959
Homologs : HomoloGeneCCNG1
Homology/Alignments : Family Browser (UCSC)CCNG1
Gene fusions - Rearrangements
Tumor Fusion PortalCCNG1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCNG1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCNG1
dbVarCCNG1
ClinVarCCNG1
1000_GenomesCCNG1 
Exome Variant ServerCCNG1
ExAC (Exome Aggregation Consortium)ENSG00000113328
GNOMAD BrowserENSG00000113328
Genetic variants : HAPMAP900
Genomic Variants (DGV)CCNG1 [DGVbeta]
DECIPHERCCNG1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCNG1 
Mutations
ICGC Data PortalCCNG1 
TCGA Data PortalCCNG1 
Broad Tumor PortalCCNG1
OASIS PortalCCNG1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCNG1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCNG1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCNG1
DgiDB (Drug Gene Interaction Database)CCNG1
DoCM (Curated mutations)CCNG1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCNG1 (select a term)
intoGenCCNG1
Cancer3DCCNG1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601578   
Orphanet
DisGeNETCCNG1
MedgenCCNG1
Genetic Testing Registry CCNG1
NextProtP51959 [Medical]
TSGene900
GENETestsCCNG1
Target ValidationCCNG1
Huge Navigator CCNG1 [HugePedia]
snp3D : Map Gene to Disease900
BioCentury BCIQCCNG1
ClinGenCCNG1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD900
Chemical/Pharm GKB GenePA26157
Clinical trialCCNG1
Miscellaneous
canSAR (ICR)CCNG1 (select the gene name)
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCNG1
EVEXCCNG1
GoPubMedCCNG1
iHOPCCNG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Nov 21 14:06:30 CET 2017

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