Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CCNG2 (cyclin G2)

Identity

Other alias-
HGNC (Hugo) CCNG2
LocusID (NCBI) 901
Atlas_Id 960
Location 4q21.1  [Link to chromosome band 4q21]
Location_base_pair Starts at 77157204 and ends at 77170060 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CAPS (19p13.3) / CCNG2 (4q21.1)GALNS (16q24.3) / CCNG2 (4q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCNG2   1593
Cards
Entrez_Gene (NCBI)CCNG2  901  cyclin G2
Aliases
GeneCards (Weizmann)CCNG2
Ensembl hg19 (Hinxton)ENSG00000138764 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000138764 [Gene_View]  chr4:77157204-77170060 [Contig_View]  CCNG2 [Vega]
ICGC DataPortalENSG00000138764
TCGA cBioPortalCCNG2
AceView (NCBI)CCNG2
Genatlas (Paris)CCNG2
WikiGenes901
SOURCE (Princeton)CCNG2
Genetics Home Reference (NIH)CCNG2
Genomic and cartography
GoldenPath hg38 (UCSC)CCNG2  -     chr4:77157204-77170060 +  4q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCNG2  -     4q21.1   [Description]    (hg19-Feb_2009)
EnsemblCCNG2 - 4q21.1 [CytoView hg19]  CCNG2 - 4q21.1 [CytoView hg38]
Mapping of homologs : NCBICCNG2 [Mapview hg19]  CCNG2 [Mapview hg38]
OMIM603203   
Gene and transcription
Genbank (Entrez)AK054785 AK092638 AK292029 AK293899 AL080193
RefSeq transcript (Entrez)NM_004354
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCNG2
Cluster EST : UnigeneHs.740456 [ NCBI ]
CGAP (NCI)Hs.740456
Alternative Splicing GalleryENSG00000138764
Gene ExpressionCCNG2 [ NCBI-GEO ]   CCNG2 [ EBI - ARRAY_EXPRESS ]   CCNG2 [ SEEK ]   CCNG2 [ MEM ]
Gene Expression Viewer (FireBrowse)CCNG2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)901
GTEX Portal (Tissue expression)CCNG2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ16589   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ16589  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ16589
Splice isoforms : SwissVarQ16589
PhosPhoSitePlusQ16589
Domains : Interpro (EBI)CCNG2    Cyclin-like    Cyclin_N   
Domain families : Pfam (Sanger)Cyclin_N (PF00134)   
Domain families : Pfam (NCBI)pfam00134   
Domain families : Smart (EMBL)CYCLIN (SM00385)  
Conserved Domain (NCBI)CCNG2
DMDM Disease mutations901
Blocks (Seattle)CCNG2
SuperfamilyQ16589
Human Protein AtlasENSG00000138764
Peptide AtlasQ16589
HPRD04438
IPIIPI00002976   IPI00166843   IPI00966811   
Protein Interaction databases
DIP (DOE-UCLA)Q16589
IntAct (EBI)Q16589
FunCoupENSG00000138764
BioGRIDCCNG2
STRING (EMBL)CCNG2
ZODIACCCNG2
Ontologies - Pathways
QuickGOQ16589
Ontology : AmiGOcell cycle checkpoint  cytoplasm  cell cycle  cell division  
Ontology : EGO-EBIcell cycle checkpoint  cytoplasm  cell cycle  cell division  
Pathways : KEGGFoxO signaling pathway    p53 signaling pathway   
NDEx NetworkCCNG2
Atlas of Cancer Signalling NetworkCCNG2
Wikipedia pathwaysCCNG2
Orthology - Evolution
OrthoDB901
GeneTree (enSembl)ENSG00000138764
Phylogenetic Trees/Animal Genes : TreeFamCCNG2
HOVERGENQ16589
HOGENOMQ16589
Homologs : HomoloGeneCCNG2
Homology/Alignments : Family Browser (UCSC)CCNG2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCNG2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCNG2
dbVarCCNG2
ClinVarCCNG2
1000_GenomesCCNG2 
Exome Variant ServerCCNG2
ExAC (Exome Aggregation Consortium)CCNG2 (select the gene name)
Genetic variants : HAPMAP901
Genomic Variants (DGV)CCNG2 [DGVbeta]
DECIPHERCCNG2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCNG2 
Mutations
ICGC Data PortalCCNG2 
TCGA Data PortalCCNG2 
Broad Tumor PortalCCNG2
OASIS PortalCCNG2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCNG2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCNG2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCNG2
DgiDB (Drug Gene Interaction Database)CCNG2
DoCM (Curated mutations)CCNG2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCNG2 (select a term)
intoGenCCNG2
Cancer3DCCNG2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603203   
Orphanet
MedgenCCNG2
Genetic Testing Registry CCNG2
NextProtQ16589 [Medical]
TSGene901
GENETestsCCNG2
Target ValidationCCNG2
Huge Navigator CCNG2 [HugePedia]
snp3D : Map Gene to Disease901
BioCentury BCIQCCNG2
ClinGenCCNG2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD901
Chemical/Pharm GKB GenePA26158
Clinical trialCCNG2
Miscellaneous
canSAR (ICR)CCNG2 (select the gene name)
Probes
Litterature
PubMed37 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCNG2
EVEXCCNG2
GoPubMedCCNG2
iHOPCCNG2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:27:12 CEST 2017

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