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CCNI (cyclin I)

Identity

Alias_symbol (synonym)CCNI1
Other aliasCYC1
CYI
HGNC (Hugo) CCNI
LocusID (NCBI) 10983
Atlas_Id 47697
Location 4q21.1  [Link to chromosome band 4q21]
Location_base_pair Starts at 77048021 and ends at 77075972 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CCNI (4q21.1) / CCNI (4q21.1)CCNI (4q21.1) / CTSZ (20q13.32)CCNI (4q21.1) / TXLNGY (Yq11.222)
MALAT1 (11q13.1) / CCNI (4q21.1)SHROOM3 (4q21.1) / CCNI (4q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCNI   1595
Cards
Entrez_Gene (NCBI)CCNI  10983  cyclin I
AliasesCCNI1; CYC1; CYI
GeneCards (Weizmann)CCNI
Ensembl hg19 (Hinxton)ENSG00000118816 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000118816 [Gene_View]  chr4:77048021-77075972 [Contig_View]  CCNI [Vega]
ICGC DataPortalENSG00000118816
TCGA cBioPortalCCNI
AceView (NCBI)CCNI
Genatlas (Paris)CCNI
WikiGenes10983
SOURCE (Princeton)CCNI
Genetics Home Reference (NIH)CCNI
Genomic and cartography
GoldenPath hg38 (UCSC)CCNI  -     chr4:77048021-77075972 -  4q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCNI  -     4q21.1   [Description]    (hg19-Feb_2009)
EnsemblCCNI - 4q21.1 [CytoView hg19]  CCNI - 4q21.1 [CytoView hg38]
Mapping of homologs : NCBICCNI [Mapview hg19]  CCNI [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB209766 AF135162 AK222931 AK301111 AK312632
RefSeq transcript (Entrez)NM_001348132 NM_001348133 NM_001348134 NM_001348135 NM_001348136 NM_001348137 NM_001348138 NM_001348139 NM_001348140 NM_006835
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCNI
Cluster EST : UnigeneHs.518827 [ NCBI ]
CGAP (NCI)Hs.518827
Alternative Splicing GalleryENSG00000118816
Gene ExpressionCCNI [ NCBI-GEO ]   CCNI [ EBI - ARRAY_EXPRESS ]   CCNI [ SEEK ]   CCNI [ MEM ]
Gene Expression Viewer (FireBrowse)CCNI [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10983
GTEX Portal (Tissue expression)CCNI
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14094   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14094  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14094
Splice isoforms : SwissVarQ14094
PhosPhoSitePlusQ14094
Domains : Interpro (EBI)Cyclin-like    Cyclin_I    Cyclin_N   
Domain families : Pfam (Sanger)Cyclin_N (PF00134)   
Domain families : Pfam (NCBI)pfam00134   
Domain families : Smart (EMBL)CYCLIN (SM00385)  
Conserved Domain (NCBI)CCNI
DMDM Disease mutations10983
Blocks (Seattle)CCNI
SuperfamilyQ14094
Human Protein AtlasENSG00000118816
Peptide AtlasQ14094
HPRD16690
IPIIPI00028541   IPI00921906   IPI00964906   IPI00964166   IPI00968113   IPI00967791   
Protein Interaction databases
DIP (DOE-UCLA)Q14094
IntAct (EBI)Q14094
FunCoupENSG00000118816
BioGRIDCCNI
STRING (EMBL)CCNI
ZODIACCCNI
Ontologies - Pathways
QuickGOQ14094
Ontology : AmiGOspermatogenesis  regulation of cell cycle  
Ontology : EGO-EBIspermatogenesis  regulation of cell cycle  
NDEx NetworkCCNI
Atlas of Cancer Signalling NetworkCCNI
Wikipedia pathwaysCCNI
Orthology - Evolution
OrthoDB10983
GeneTree (enSembl)ENSG00000118816
Phylogenetic Trees/Animal Genes : TreeFamCCNI
HOVERGENQ14094
HOGENOMQ14094
Homologs : HomoloGeneCCNI
Homology/Alignments : Family Browser (UCSC)CCNI
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCNI [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCNI
dbVarCCNI
ClinVarCCNI
1000_GenomesCCNI 
Exome Variant ServerCCNI
ExAC (Exome Aggregation Consortium)CCNI (select the gene name)
Genetic variants : HAPMAP10983
Genomic Variants (DGV)CCNI [DGVbeta]
DECIPHERCCNI [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCNI 
Mutations
ICGC Data PortalCCNI 
TCGA Data PortalCCNI 
Broad Tumor PortalCCNI
OASIS PortalCCNI [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCNI  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCNI
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCNI
DgiDB (Drug Gene Interaction Database)CCNI
DoCM (Curated mutations)CCNI (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCNI (select a term)
intoGenCCNI
Cancer3DCCNI(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCCNI
Genetic Testing Registry CCNI
NextProtQ14094 [Medical]
TSGene10983
GENETestsCCNI
Target ValidationCCNI
Huge Navigator CCNI [HugePedia]
snp3D : Map Gene to Disease10983
BioCentury BCIQCCNI
ClinGenCCNI
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10983
Chemical/Pharm GKB GenePA26160
Clinical trialCCNI
Miscellaneous
canSAR (ICR)CCNI (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCNI
EVEXCCNI
GoPubMedCCNI
iHOPCCNI
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:49:04 CEST 2017

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