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X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CCNY (cyclin Y)

Identity

Alias (NCBI)C10orf9
CBCP1
CCNX
CFP1
HGNC (Hugo) CCNY
HGNC Alias symbCFP1
CBCP1
HGNC Previous nameC10orf9
HGNC Previous namechromosome 10 open reading frame 9
LocusID (NCBI) 219771
Atlas_Id 51503
Location 10p11.21  [Link to chromosome band 10p11]
Location_base_pair Starts at 35247025 and ends at 35572666 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CCNY (10p11.21) / AKAP10 (17p11.2)CCNY (10p11.21) / ANK3 (10q21.2)CCNY (10p11.21) / BRAF (7q34)
CCNY (10p11.21) / CCNY (10p11.21)CCNY (10p11.21) / COG3 (13q14.13)CCNY (10p11.21) / CREM (10p11.21)
CCNY (10p11.21) / CUL2 (10p11.21)CCNY (10p11.21) / DENND1A (9q33.3)CCNY (10p11.21) / PARD3 (10p11.22)
CCNY (10p11.21) / PTPRD (9p24.1)CCNY (10p11.21) / ZNF652 (17q21.32)FOXO1 (13q14.11) / CCNY (10p11.21)
WARS (14q32.2) / CCNY (10p11.21)CCNY 10p11.21 / AKAP10 17p11.2CCNY 10p11.21 / ANK3 10q21.2
CCNY 10p11.21 / BRAF 7q34CCNY 10p11.21 / CREM 10p11.21CCNY 10p11.21 / DENND1A 9q33.3
CCNY 10p11.21 / PTPRD 9p24.1WARS 14q32.2 / CCNY 10p11.21

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)CCNY   23354
Cards
Entrez_Gene (NCBI)CCNY    cyclin Y
AliasesC10orf9; CBCP1; CCNX; CFP1
GeneCards (Weizmann)CCNY
Ensembl hg19 (Hinxton)ENSG00000108100 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000108100 [Gene_View]  ENSG00000108100 [Sequence]  chr10:35247025-35572666 [Contig_View]  CCNY [Vega]
ICGC DataPortalENSG00000108100
TCGA cBioPortalCCNY
AceView (NCBI)CCNY
Genatlas (Paris)CCNY
SOURCE (Princeton)CCNY
Genetics Home Reference (NIH)CCNY
Genomic and cartography
GoldenPath hg38 (UCSC)CCNY  -     chr10:35247025-35572666 +  10p11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCNY  -     10p11.21   [Description]    (hg19-Feb_2009)
GoldenPathCCNY - 10p11.21 [CytoView hg19]  CCNY - 10p11.21 [CytoView hg38]
ImmunoBaseENSG00000108100
genome Data Viewer NCBICCNY [Mapview hg19]  
OMIM612786   
Gene and transcription
Genbank (Entrez)AA476431 AF413522 AF429969 AF465728 AF465729
RefSeq transcript (Entrez)NM_001282852 NM_001282853 NM_001282854 NM_145012 NM_181698
Consensus coding sequences : CCDS (NCBI)CCNY
Alternative Splicing GalleryENSG00000108100
Gene ExpressionCCNY [ NCBI-GEO ]   CCNY [ EBI - ARRAY_EXPRESS ]   CCNY [ SEEK ]   CCNY [ MEM ]
Gene Expression Viewer (FireBrowse)CCNY [ Firebrowse - Broad ]
GenevisibleExpression of CCNY in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219771
GTEX Portal (Tissue expression)CCNY
Human Protein AtlasENSG00000108100-CCNY [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCNY
Human Protein Atlas [tissue]ENSG00000108100-CCNY [tissue]
HPRD10700
Protein Interaction databases
BioGRIDCCNY
STRING (EMBL)CCNY
ZODIACCCNY
Ontologies - Pathways
Litterature
PubMed57 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCCNY
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Sep 15 22:07:01 CEST 2021

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