Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CCPG1 (cell cycle progression 1)

Identity

Alias_symbol (synonym)KIAA1254
CPR8
Other alias
HGNC (Hugo) CCPG1
LocusID (NCBI) 9236
Atlas_Id 40141
Location 15q21.3  [Link to chromosome band 15q21]
Location_base_pair Starts at 55647421 and ends at 55700708 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CCPG1 (15q21.3) / DNAJB11 (3q27.3)CCPG1 (15q21.3) / NAT10 (11p13)CCPG1 (15q21.3) / SIRT3 (11p15.5)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCPG1   24227
Cards
Entrez_Gene (NCBI)CCPG1  9236  cell cycle progression 1
AliasesCPR8
GeneCards (Weizmann)CCPG1
Ensembl hg19 (Hinxton)ENSG00000260916 [Gene_View]  chr15:55647421-55700708 [Contig_View]  CCPG1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000260916 [Gene_View]  chr15:55647421-55700708 [Contig_View]  CCPG1 [Vega]
ICGC DataPortalENSG00000260916
TCGA cBioPortalCCPG1
AceView (NCBI)CCPG1
Genatlas (Paris)CCPG1
WikiGenes9236
SOURCE (Princeton)CCPG1
Genetics Home Reference (NIH)CCPG1
Genomic and cartography
GoldenPath hg19 (UCSC)CCPG1  -     chr15:55647421-55700708 -  15q21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CCPG1  -     15q21.3   [Description]    (hg38-Dec_2013)
EnsemblCCPG1 - 15q21.3 [CytoView hg19]  CCPG1 - 15q21.3 [CytoView hg38]
Mapping of homologs : NCBICCPG1 [Mapview hg19]  CCPG1 [Mapview hg38]
OMIM611326   
Gene and transcription
Genbank (Entrez)AA740595 AB033080 AF011794 AF212228 AK022459
RefSeq transcript (Entrez)NM_001204450 NM_001204451 NM_004748 NM_020739
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_010194 NW_004929398
Consensus coding sequences : CCDS (NCBI)CCPG1
Cluster EST : UnigeneHs.285051 [ NCBI ]
CGAP (NCI)Hs.285051
Alternative Splicing GalleryENSG00000260916
Gene ExpressionCCPG1 [ NCBI-GEO ]   CCPG1 [ EBI - ARRAY_EXPRESS ]   CCPG1 [ SEEK ]   CCPG1 [ MEM ]
Gene Expression Viewer (FireBrowse)CCPG1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9236
GTEX Portal (Tissue expression)CCPG1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9ULG6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9ULG6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9ULG6
Splice isoforms : SwissVarQ9ULG6
PhosPhoSitePlusQ9ULG6
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CCPG1
DMDM Disease mutations9236
Blocks (Seattle)CCPG1
SuperfamilyQ9ULG6
Human Protein AtlasENSG00000260916
Peptide AtlasQ9ULG6
HPRD09895
IPIIPI00941283   IPI00306683   IPI00297235   
Protein Interaction databases
DIP (DOE-UCLA)Q9ULG6
IntAct (EBI)Q9ULG6
FunCoupENSG00000260916
BioGRIDCCPG1
STRING (EMBL)CCPG1
ZODIACCCPG1
Ontologies - Pathways
QuickGOQ9ULG6
Ontology : AmiGOmolecular_function  protein binding  cell cycle  positive regulation of cell proliferation  integral component of membrane  positive regulation of cell cycle  positive regulation of transcription from RNA polymerase II promoter  regulation of Rho guanyl-nucleotide exchange factor activity  
Ontology : EGO-EBImolecular_function  protein binding  cell cycle  positive regulation of cell proliferation  integral component of membrane  positive regulation of cell cycle  positive regulation of transcription from RNA polymerase II promoter  regulation of Rho guanyl-nucleotide exchange factor activity  
NDEx NetworkCCPG1
Atlas of Cancer Signalling NetworkCCPG1
Wikipedia pathwaysCCPG1
Orthology - Evolution
OrthoDB9236
GeneTree (enSembl)ENSG00000260916
Phylogenetic Trees/Animal Genes : TreeFamCCPG1
HOVERGENQ9ULG6
HOGENOMQ9ULG6
Homologs : HomoloGeneCCPG1
Homology/Alignments : Family Browser (UCSC)CCPG1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCPG1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCPG1
dbVarCCPG1
ClinVarCCPG1
1000_GenomesCCPG1 
Exome Variant ServerCCPG1
ExAC (Exome Aggregation Consortium)CCPG1 (select the gene name)
Genetic variants : HAPMAP9236
Genomic Variants (DGV)CCPG1 [DGVbeta]
DECIPHER (Syndromes)15:55647421-55700708  ENSG00000260916
CONAN: Copy Number AnalysisCCPG1 
Mutations
ICGC Data PortalCCPG1 
TCGA Data PortalCCPG1 
Broad Tumor PortalCCPG1
OASIS PortalCCPG1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCPG1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCPG1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCPG1
DgiDB (Drug Gene Interaction Database)CCPG1
DoCM (Curated mutations)CCPG1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCPG1 (select a term)
intoGenCCPG1
Cancer3DCCPG1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611326   
Orphanet
MedgenCCPG1
Genetic Testing Registry CCPG1
NextProtQ9ULG6 [Medical]
TSGene9236
GENETestsCCPG1
Huge Navigator CCPG1 [HugePedia]
snp3D : Map Gene to Disease9236
BioCentury BCIQCCPG1
ClinGenCCPG1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9236
Chemical/Pharm GKB GenePA134967250
Clinical trialCCPG1
Miscellaneous
canSAR (ICR)CCPG1 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCPG1
EVEXCCPG1
GoPubMedCCPG1
iHOPCCPG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 30 14:55:30 CEST 2017

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