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CCT8L2 (chaperonin containing TCP1 subunit 8 like 2)

Identity

Alias_nameschaperonin containing TCP1, subunit 8 (theta)-like 2
Alias_symbol (synonym)CESK1
Other alias
HGNC (Hugo) CCT8L2
LocusID (NCBI) 150160
Atlas_Id 61606
Location 22q11.1  [Link to chromosome band 22q11]
Location_base_pair Starts at 16590758 and ends at 16592810 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CCT8L2   15553
Cards
Entrez_Gene (NCBI)CCT8L2  150160  chaperonin containing TCP1 subunit 8 like 2
AliasesCESK1
GeneCards (Weizmann)CCT8L2
Ensembl hg19 (Hinxton)ENSG00000198445 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198445 [Gene_View]  chr22:16590758-16592810 [Contig_View]  CCT8L2 [Vega]
ICGC DataPortalENSG00000198445
TCGA cBioPortalCCT8L2
AceView (NCBI)CCT8L2
Genatlas (Paris)CCT8L2
WikiGenes150160
SOURCE (Princeton)CCT8L2
Genetics Home Reference (NIH)CCT8L2
Genomic and cartography
GoldenPath hg38 (UCSC)CCT8L2  -     chr22:16590758-16592810 -  22q11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CCT8L2  -     22q11.1   [Description]    (hg19-Feb_2009)
EnsemblCCT8L2 - 22q11.1 [CytoView hg19]  CCT8L2 - 22q11.1 [CytoView hg38]
Mapping of homologs : NCBICCT8L2 [Mapview hg19]  CCT8L2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC022006 BC033797 BC100811 BC100812 BC100813
RefSeq transcript (Entrez)NM_014406
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CCT8L2
Cluster EST : UnigeneHs.128342 [ NCBI ]
CGAP (NCI)Hs.128342
Alternative Splicing GalleryENSG00000198445
Gene ExpressionCCT8L2 [ NCBI-GEO ]   CCT8L2 [ EBI - ARRAY_EXPRESS ]   CCT8L2 [ SEEK ]   CCT8L2 [ MEM ]
Gene Expression Viewer (FireBrowse)CCT8L2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)150160
GTEX Portal (Tissue expression)CCT8L2
Human Protein AtlasENSG00000198445-CCT8L2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96SF2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96SF2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96SF2
Splice isoforms : SwissVarQ96SF2
PhosPhoSitePlusQ96SF2
Domains : Interpro (EBI)Chaperone_TCP-1    Cpn60/TCP-1    GroEL-like_apical_dom    GROEL-like_equatorial    TCP-1-like_intermed   
Domain families : Pfam (Sanger)Cpn60_TCP1 (PF00118)   
Domain families : Pfam (NCBI)pfam00118   
Conserved Domain (NCBI)CCT8L2
DMDM Disease mutations150160
Blocks (Seattle)CCT8L2
SuperfamilyQ96SF2
Human Protein Atlas [tissue]ENSG00000198445-CCT8L2 [tissue]
Peptide AtlasQ96SF2
HPRD16708
IPIIPI00654601   IPI00979247   
Protein Interaction databases
DIP (DOE-UCLA)Q96SF2
IntAct (EBI)Q96SF2
FunCoupENSG00000198445
BioGRIDCCT8L2
STRING (EMBL)CCT8L2
ZODIACCCT8L2
Ontologies - Pathways
QuickGOQ96SF2
Ontology : AmiGOanion channel activity  ATP binding  chaperonin-containing T-complex  'de novo' protein folding  transport  calcium-activated potassium channel activity  protein binding involved in protein folding  unfolded protein binding  chaperone-mediated protein folding  potassium ion transmembrane transport  anion transmembrane transport  
Ontology : EGO-EBIanion channel activity  ATP binding  chaperonin-containing T-complex  'de novo' protein folding  transport  calcium-activated potassium channel activity  protein binding involved in protein folding  unfolded protein binding  chaperone-mediated protein folding  potassium ion transmembrane transport  anion transmembrane transport  
NDEx NetworkCCT8L2
Atlas of Cancer Signalling NetworkCCT8L2
Wikipedia pathwaysCCT8L2
Orthology - Evolution
OrthoDB150160
GeneTree (enSembl)ENSG00000198445
Phylogenetic Trees/Animal Genes : TreeFamCCT8L2
HOVERGENQ96SF2
HOGENOMQ96SF2
Homologs : HomoloGeneCCT8L2
Homology/Alignments : Family Browser (UCSC)CCT8L2
Gene fusions - Rearrangements
Tumor Fusion PortalCCT8L2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCCT8L2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CCT8L2
dbVarCCT8L2
ClinVarCCT8L2
1000_GenomesCCT8L2 
Exome Variant ServerCCT8L2
ExAC (Exome Aggregation Consortium)ENSG00000198445
GNOMAD BrowserENSG00000198445
Genetic variants : HAPMAP150160
Genomic Variants (DGV)CCT8L2 [DGVbeta]
DECIPHERCCT8L2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCCT8L2 
Mutations
ICGC Data PortalCCT8L2 
TCGA Data PortalCCT8L2 
Broad Tumor PortalCCT8L2
OASIS PortalCCT8L2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCCT8L2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCCT8L2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CCT8L2
DgiDB (Drug Gene Interaction Database)CCT8L2
DoCM (Curated mutations)CCT8L2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CCT8L2 (select a term)
intoGenCCT8L2
Cancer3DCCT8L2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETCCT8L2
MedgenCCT8L2
Genetic Testing Registry CCT8L2
NextProtQ96SF2 [Medical]
TSGene150160
GENETestsCCT8L2
Target ValidationCCT8L2
Huge Navigator CCT8L2 [HugePedia]
snp3D : Map Gene to Disease150160
BioCentury BCIQCCT8L2
ClinGenCCT8L2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150160
Chemical/Pharm GKB GenePA162382100
Clinical trialCCT8L2
Miscellaneous
canSAR (ICR)CCT8L2 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCCT8L2
EVEXCCT8L2
GoPubMedCCT8L2
iHOPCCT8L2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:43:30 CET 2017

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