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CD160 (CD160 molecule)

Identity

Alias_namesCD160 antigen
Alias_symbol (synonym)BY55
NK1
NK28
Other alias
HGNC (Hugo) CD160
LocusID (NCBI) 11126
Atlas_Id 45911
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 145695798 and ends at 145715639 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CD160   17013
Cards
Entrez_Gene (NCBI)CD160  11126  CD160 molecule
AliasesBY55; NK1; NK28
GeneCards (Weizmann)CD160
Ensembl hg19 (Hinxton)ENSG00000117281 [Gene_View]  chr1:145695798-145715639 [Contig_View]  CD160 [Vega]
Ensembl hg38 (Hinxton)ENSG00000117281 [Gene_View]  chr1:145695798-145715639 [Contig_View]  CD160 [Vega]
ICGC DataPortalENSG00000117281
TCGA cBioPortalCD160
AceView (NCBI)CD160
Genatlas (Paris)CD160
WikiGenes11126
SOURCE (Princeton)CD160
Genetics Home Reference (NIH)CD160
Genomic and cartography
GoldenPath hg19 (UCSC)CD160  -     chr1:145695798-145715639 -  1q21.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CD160  -     1q21.1   [Description]    (hg38-Dec_2013)
EnsemblCD160 - 1q21.1 [CytoView hg19]  CD160 - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBICD160 [Mapview hg19]  CD160 [Mapview hg38]
OMIM604463   
Gene and transcription
Genbank (Entrez)AA463248 AF060981 AI241015 AK128370 BC014465
RefSeq transcript (Entrez)NM_007053
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)CD160
Cluster EST : UnigeneHs.740780 [ NCBI ]
CGAP (NCI)Hs.740780
Alternative Splicing GalleryENSG00000117281
Gene ExpressionCD160 [ NCBI-GEO ]   CD160 [ EBI - ARRAY_EXPRESS ]   CD160 [ SEEK ]   CD160 [ MEM ]
Gene Expression Viewer (FireBrowse)CD160 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11126
GTEX Portal (Tissue expression)CD160
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95971   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95971  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95971
Splice isoforms : SwissVarO95971
PhosPhoSitePlusO95971
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)CD160
DMDM Disease mutations11126
Blocks (Seattle)CD160
SuperfamilyO95971
Human Protein AtlasENSG00000117281
Peptide AtlasO95971
HPRD06833
IPIIPI00922521   IPI00443768   
Protein Interaction databases
DIP (DOE-UCLA)O95971
IntAct (EBI)O95971
FunCoupENSG00000117281
BioGRIDCD160
STRING (EMBL)CD160
ZODIACCD160
Ontologies - Pathways
QuickGOO95971
Ontology : AmiGOreceptor activity  receptor binding  protein binding  plasma membrane  cellular defense response  cell surface receptor signaling pathway  cell proliferation  MHC class I receptor activity  anchored component of plasma membrane  regulation of immune response  defense response to Gram-negative bacterium  
Ontology : EGO-EBIreceptor activity  receptor binding  protein binding  plasma membrane  cellular defense response  cell surface receptor signaling pathway  cell proliferation  MHC class I receptor activity  anchored component of plasma membrane  regulation of immune response  defense response to Gram-negative bacterium  
NDEx NetworkCD160
Atlas of Cancer Signalling NetworkCD160
Wikipedia pathwaysCD160
Orthology - Evolution
OrthoDB11126
GeneTree (enSembl)ENSG00000117281
Phylogenetic Trees/Animal Genes : TreeFamCD160
HOVERGENO95971
HOGENOMO95971
Homologs : HomoloGeneCD160
Homology/Alignments : Family Browser (UCSC)CD160
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCD160 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CD160
dbVarCD160
ClinVarCD160
1000_GenomesCD160 
Exome Variant ServerCD160
ExAC (Exome Aggregation Consortium)CD160 (select the gene name)
Genetic variants : HAPMAP11126
Genomic Variants (DGV)CD160 [DGVbeta]
DECIPHER (Syndromes)1:145695798-145715639  ENSG00000117281
CONAN: Copy Number AnalysisCD160 
Mutations
ICGC Data PortalCD160 
TCGA Data PortalCD160 
Broad Tumor PortalCD160
OASIS PortalCD160 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCD160  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCD160
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CD160
DgiDB (Drug Gene Interaction Database)CD160
DoCM (Curated mutations)CD160 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CD160 (select a term)
intoGenCD160
Cancer3DCD160(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604463   
Orphanet
MedgenCD160
Genetic Testing Registry CD160
NextProtO95971 [Medical]
TSGene11126
GENETestsCD160
Huge Navigator CD160 [HugePedia]
snp3D : Map Gene to Disease11126
BioCentury BCIQCD160
ClinGenCD160
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11126
Chemical/Pharm GKB GenePA134943137
Clinical trialCD160
Miscellaneous
canSAR (ICR)CD160 (select the gene name)
Probes
Litterature
PubMed33 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCD160
EVEXCD160
GoPubMedCD160
iHOPCD160
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:55:34 CEST 2017

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