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CD164 (CD164 molecule, sialomucin)

Identity

Other namesMGC-24
MUC-24
endolyn
HGNC (Hugo) CD164
LocusID (NCBI) 8763
Location 6q21
Location_base_pair Starts at 109687717 and ends at 109703762 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CD164   1632
Cards
Entrez_Gene (NCBI)CD164  8763  CD164 molecule, sialomucin
GeneCards (Weizmann)CD164
Ensembl (Hinxton)ENSG00000135535 [Gene_View]  chr6:109687717-109703762 [Contig_View]  CD164 [Vega]
AceView (NCBI)CD164
Genatlas (Paris)CD164
WikiGenes8763
SOURCE (Princeton)NM_001142401 NM_001142402 NM_001142403 NM_001142404 NM_006016
Genomic and cartography
GoldenPath (UCSC)CD164  -  6q21   chr6:109687717-109703762 -  6q21   [Description]    (hg19-Feb_2009)
EnsemblCD164 - 6q21 [CytoView]
Mapping of homologs : NCBICD164 [Mapview]
OMIM603356   
Gene and transcription
Genbank (Entrez)AF106518 AF263279 AF299341 AF299342 AF299343
RefSeq transcript (Entrez)NM_001142401 NM_001142402 NM_001142403 NM_001142404 NM_006016
RefSeq genomic (Entrez)AC_000138 NC_000006 NC_018917 NT_025741 NW_001838990 NW_004929328
Consensus coding sequences : CCDS (NCBI)CD164
Cluster EST : UnigeneHs.520313 [ NCBI ]
CGAP (NCI)Hs.520313
Alternative Splicing : Fast-db (Paris)GSHG0026828
Alternative Splicing GalleryENSG00000135535
Gene ExpressionCD164 [ NCBI-GEO ]     CD164 [ SEEK ]   CD164 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ04900 (Uniprot)
NextProtQ04900  [Medical]
With graphics : InterProQ04900
Splice isoforms : SwissVarQ04900 (Swissvar)
Domains : Interpro (EBI)CD164_MGC24   
Related proteins : CluSTrQ04900
Domain families : Pfam (Sanger)MGC-24 (PF05283)   
Domain families : Pfam (NCBI)pfam05283   
DMDM Disease mutations8763
Blocks (Seattle)Q04900
Human Protein AtlasENSG00000135535
Peptide AtlasQ04900
HPRD04523
IPIIPI00183465   IPI00030241   IPI00165167   IPI00163902   IPI00909137   IPI00909553   IPI00552230   IPI00964329   
Protein Interaction databases
DIP (DOE-UCLA)Q04900
IntAct (EBI)Q04900
FunCoupENSG00000135535
BioGRIDCD164
InParanoidQ04900
Interologous Interaction database Q04900
IntegromeDBCD164
STRING (EMBL)CD164
Ontologies - Pathways
Ontology : AmiGOprotein binding  extracellular region  lysosome  lysosomal membrane  endosome  plasma membrane  integral to plasma membrane  immune response  cell adhesion  heterophilic cell-cell adhesion  negative regulation of cell adhesion  signal transduction  multicellular organismal development  muscle organ development  negative regulation of cell proliferation  endosome membrane  hemopoiesis  
Ontology : EGO-EBIprotein binding  extracellular region  lysosome  lysosomal membrane  endosome  plasma membrane  integral to plasma membrane  immune response  cell adhesion  heterophilic cell-cell adhesion  negative regulation of cell adhesion  signal transduction  multicellular organismal development  muscle organ development  negative regulation of cell proliferation  endosome membrane  hemopoiesis  
Pathways : KEGGLysosome   
REACTOMECD164
Protein Interaction DatabaseCD164
Wikipedia pathwaysCD164
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CD164
SNP (GeneSNP Utah)CD164
SNP : HGBaseCD164
Genetic variants : HAPMAPCD164
1000_GenomesCD164 
ICGC programENSG00000135535 
Somatic Mutations in Cancer : COSMICCD164 
CONAN: Copy Number AnalysisCD164 
Mutations and Diseases : HGMDCD164
OMIM603356   
GENETestsCD164
Disease Genetic AssociationCD164
Huge Navigator CD164 [HugePedia]  CD164 [HugeCancerGEM]
Genomic VariantsCD164  CD164 [DGVbeta]
Exome VariantCD164
dbVarCD164
ClinVarCD164
snp3D : Map Gene to Disease8763
General knowledge
Homologs : HomoloGeneCD164
Homology/Alignments : Family Browser (UCSC)CD164
Phylogenetic Trees/Animal Genes : TreeFamCD164
Chemical/Protein Interactions : CTD8763
Chemical/Pharm GKB GenePA26191
Clinical trialCD164
Cancer Resource (Charite)ENSG00000135535
Other databases
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
CoreMineCD164
iHOPCD164
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Mar 31 09:11:08 CEST 2014

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