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CD28 (CD28 molecule)

Identity

Alias (NCBI)Tp44
HGNC (Hugo) CD28
HGNC Alias nameT-cell-specific surface glycoprotein
HGNC Previous nameCD28 antigen (Tp44)
LocusID (NCBI) 940
Atlas_Id 52848
Location 2q33.2  [Link to chromosome band 2q33]
Location_base_pair Starts at 203706639 and ends at 203738912 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CD28 (2q33.2) / KANSL2 (12q13.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 2 ]
  Follicular lymphomas of germinal center (B- or T-cell) origin
t(1;1)(q24;q25) RCSD1/ABL2::inv(1)(q24q25) RCSD1/ABL2


External links

Nomenclature
HGNC (Hugo)CD28   1653
Cards
Entrez_Gene (NCBI)CD28    CD28 molecule
AliasesTp44
GeneCards (Weizmann)CD28
Ensembl hg19 (Hinxton)ENSG00000178562 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178562 [Gene_View]  ENSG00000178562 [Sequence]  chr2:203706639-203738912 [Contig_View]  CD28 [Vega]
ICGC DataPortalENSG00000178562
TCGA cBioPortalCD28
AceView (NCBI)CD28
Genatlas (Paris)CD28
SOURCE (Princeton)CD28
Genetics Home Reference (NIH)CD28
Genomic and cartography
GoldenPath hg38 (UCSC)CD28  -     chr2:203706639-203738912 +  2q33.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CD28  -     2q33.2   [Description]    (hg19-Feb_2009)
GoldenPathCD28 - 2q33.2 [CytoView hg19]  CD28 - 2q33.2 [CytoView hg38]
ImmunoBaseENSG00000178562
Genome Data Viewer NCBICD28 [Mapview hg19]  
OMIM186760   
Gene and transcription
Genbank (Entrez)AA311148 AF222341 AF222342 AF222343 AJ295273
RefSeq transcript (Entrez)NM_001243077 NM_001243078 NM_006139
Consensus coding sequences : CCDS (NCBI)CD28
Gene ExpressionCD28 [ NCBI-GEO ]   CD28 [ EBI - ARRAY_EXPRESS ]   CD28 [ SEEK ]   CD28 [ MEM ]
Gene Expression Viewer (FireBrowse)CD28 [ Firebrowse - Broad ]
GenevisibleExpression of CD28 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)940
GTEX Portal (Tissue expression)CD28
Human Protein AtlasENSG00000178562-CD28 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CD28
Human Protein Atlas [tissue]ENSG00000178562-CD28 [tissue]
HPRD01727
Protein Interaction databases
BioGRIDCD28
STRING (EMBL)CD28
ZODIACCD28
Ontologies - Pathways
Litterature
PubMed392 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCD28
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:02:57 CEST 2021

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