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CD37 (CD37 molecule)

Identity

Alias (NCBI)GP52-40
TSPAN26
HGNC (Hugo) CD37
HGNC Alias symbTSPAN26
HGNC Previous nameCD37 antigen
LocusID (NCBI) 951
Atlas_Id 977
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 49335406 and ends at 49340604 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CCDC106 (19q13.42) / CD37 (19q13.33)CD37 (19q13.33) / MIR29B2 (1q32.2)MAP3K13 (3q27.2) / CD37 (19q13.33)
MCFD2 (2p21) / CD37 (19q13.33)MIR29B2 (1q32.2) / CD37 (19q13.33)CCDC106 19q13.42 / CD37 19q13.33
MAP3K13 3q27.2 / CD37 19q13.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CD37   1666
Cards
Entrez_Gene (NCBI)CD37    CD37 molecule
AliasesGP52-40; TSPAN26
GeneCards (Weizmann)CD37
Ensembl hg19 (Hinxton)ENSG00000104894 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000104894 [Gene_View]  ENSG00000104894 [Sequence]  chr19:49335406-49340604 [Contig_View]  CD37 [Vega]
ICGC DataPortalENSG00000104894
TCGA cBioPortalCD37
AceView (NCBI)CD37
Genatlas (Paris)CD37
SOURCE (Princeton)CD37
Genetics Home Reference (NIH)CD37
Genomic and cartography
GoldenPath hg38 (UCSC)CD37  -     chr19:49335406-49340604 +  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CD37  -     19q13.33   [Description]    (hg19-Feb_2009)
GoldenPathCD37 - 19q13.33 [CytoView hg19]  CD37 - 19q13.33 [CytoView hg38]
ImmunoBaseENSG00000104894
Genome Data Viewer NCBICD37 [Mapview hg19]  
OMIM151523   
Gene and transcription
Genbank (Entrez)AA767248 AK058093 AK301016 AK301328 AK316348
RefSeq transcript (Entrez)NM_001040031 NM_001774
Consensus coding sequences : CCDS (NCBI)CD37
Gene ExpressionCD37 [ NCBI-GEO ]   CD37 [ EBI - ARRAY_EXPRESS ]   CD37 [ SEEK ]   CD37 [ MEM ]
Gene Expression Viewer (FireBrowse)CD37 [ Firebrowse - Broad ]
GenevisibleExpression of CD37 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)951
GTEX Portal (Tissue expression)CD37
Human Protein AtlasENSG00000104894-CD37 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP11049   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP11049  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP11049
PhosPhoSitePlusP11049
Domaine pattern : Prosite (Expaxy)TM4_1 (PS00421)   
Domains : Interpro (EBI)Tetraspanin    Tetraspanin/Peripherin    Tetraspanin_CS    Tetraspanin_EC2_sf   
Domain families : Pfam (Sanger)Tetraspanin (PF00335)   
Domain families : Pfam (NCBI)pfam00335   
Conserved Domain (NCBI)CD37
SuperfamilyP11049
AlphaFold pdb e-kbP11049   
Human Protein Atlas [tissue]ENSG00000104894-CD37 [tissue]
HPRD01053
Protein Interaction databases
DIP (DOE-UCLA)P11049
IntAct (EBI)P11049
BioGRIDCD37
STRING (EMBL)CD37
ZODIACCD37
Ontologies - Pathways
QuickGOP11049
Ontology : AmiGOimmunological synapse  protein binding  integral component of plasma membrane  membrane  extracellular exosome  
Ontology : EGO-EBIimmunological synapse  protein binding  integral component of plasma membrane  membrane  extracellular exosome  
Pathways : KEGGHematopoietic cell lineage   
NDEx NetworkCD37
Atlas of Cancer Signalling NetworkCD37
Wikipedia pathwaysCD37
Orthology - Evolution
OrthoDB951
GeneTree (enSembl)ENSG00000104894
Phylogenetic Trees/Animal Genes : TreeFamCD37
Homologs : HomoloGeneCD37
Homology/Alignments : Family Browser (UCSC)CD37
Gene fusions - Rearrangements
Fusion : MitelmanCCDC106/CD37 [19q13.42/19q13.33]  
Fusion : MitelmanMAP3K13/CD37 [3q27.2/19q13.33]  
Fusion : QuiverCD37
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCD37 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CD37
dbVarCD37
ClinVarCD37
MonarchCD37
1000_GenomesCD37 
Exome Variant ServerCD37
GNOMAD BrowserENSG00000104894
Varsome BrowserCD37
ACMGCD37 variants
VarityP11049
Genomic Variants (DGV)CD37 [DGVbeta]
DECIPHERCD37 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCD37 
Mutations
ICGC Data PortalCD37 
TCGA Data PortalCD37 
Broad Tumor PortalCD37
OASIS PortalCD37 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCD37  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCD37
Mutations and Diseases : HGMDCD37
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCD37
DgiDB (Drug Gene Interaction Database)CD37
DoCM (Curated mutations)CD37
CIViC (Clinical Interpretations of Variants in Cancer)CD37
Cancer3DCD37
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM151523   
Orphanet
DisGeNETCD37
MedgenCD37
Genetic Testing Registry CD37
NextProtP11049 [Medical]
GENETestsCD37
Target ValidationCD37
Huge Navigator CD37 [HugePedia]
ClinGenCD37
Clinical trials, drugs, therapy
MyCancerGenomeCD37
Protein Interactions : CTDCD37
Pharm GKB GenePA26213
PharosP11049
Clinical trialCD37
Miscellaneous
canSAR (ICR)CD37
HarmonizomeCD37
DataMed IndexCD37
Probes
Litterature
PubMed40 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCD37
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:02:59 CEST 2021

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