Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CD3EAP (-)

Identity

Alias (NCBI)-
HGNC (Hugo) -
HGNC Alias symbASE-1
CAST
PAF49
HGNC Alias nameCD3 epsilon associated protein
 antisense to ERCC 1
HGNC Previous nameCD3e antigen, epsilon polypeptide associated protein
 CD3e molecule, epsilon associated protein
LocusID (NCBI) 10849
Atlas_Id 50105
Location 19q13.32  [Link to chromosome band 19q13]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CD3EAP (19q13.32) / CD3EAP (19q13.32)CERCAM (9q34.11) / CD3EAP (19q13.32)NEK4 (3p21.1) / CD3EAP (19q13.32)
PDS5B (13q13.1) / CD3EAP (19q13.32)PKP2 (12p11.21) / CD3EAP (19q13.32)UQCC1 (20q11.22) / CD3EAP (19q13.32)
PDS5B 13q13.1 / CD3EAP 19q13.32

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(13;19)(q13;q13) PDS5B/CD3EAP


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)CD3EAP    -
Aliases
GeneCards (Weizmann)CD3EAP
Ensembl hg19 (Hinxton)ENSG00000117877 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000117877 [Gene_View]  ENSG00000117877 [Sequence]  - [Contig_View]  CD3EAP [Vega]
ICGC DataPortalENSG00000117877
TCGA cBioPortalCD3EAP
AceView (NCBI)CD3EAP
Genatlas (Paris)CD3EAP
SOURCE (Princeton)CD3EAP
Genetics Home Reference (NIH)CD3EAP
Genomic and cartography
GoldenPath hg38 (UCSC)CD3EAP  -  
GoldenPath hg19 (UCSC)CD3EAP  -  
GoldenPathCD3EAP - [CytoView hg19]  CD3EAP - [CytoView hg38]
ImmunoBaseENSG00000117877
genome Data Viewer NCBICD3EAP [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CD3EAP
Alternative Splicing GalleryENSG00000117877
Gene ExpressionCD3EAP [ NCBI-GEO ]   CD3EAP [ EBI - ARRAY_EXPRESS ]   CD3EAP [ SEEK ]   CD3EAP [ MEM ]
Gene Expression Viewer (FireBrowse)CD3EAP [ Firebrowse - Broad ]
GenevisibleExpression of CD3EAP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10849
GTEX Portal (Tissue expression)CD3EAP
Human Protein AtlasENSG00000117877-CD3EAP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CD3EAP
Blocks (Seattle)CD3EAP
Human Protein Atlas [tissue]ENSG00000117877-CD3EAP [tissue]
HPRD00125
IPIIPI00645816   IPI00012788   
Protein Interaction databases
BioGRIDCD3EAP
STRING (EMBL)CD3EAP
ZODIACCD3EAP
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXCD3EAP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jan 1 18:09:05 CET 2021

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