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CD46 (CD46 molecule)

Identity

Alias (NCBI)AHUS2
MCP
MIC10
TLX
TRA2.10
HGNC (Hugo) CD46
HGNC Alias symbTRA2.10
MGC26544
TLX
HGNC Previous nameMIC10
 MCP
HGNC Previous nameantigen identified by monoclonal antibody TRA-2-10
 membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen)
 CD46 antigen, complement regulatory protein
 CD46 molecule, complement regulatory protein
LocusID (NCBI) 4179
Atlas_Id 46109
Location 1q32.2  [Link to chromosome band 1q32]
Location_base_pair Starts at 207752054 and ends at 207795504 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CD46 (1q32.2)::CD46 (1q32.2)CD46 (1q32.2)::NUCB2 (11p15.1)CD46 (1q32.2)::USH2A (1q41)
CD46 (1q32.2)::ZNF93 (19p12)MRPS25 (3p25.1)::CD46 (1q32.2)PAQR3 (4q21.21)::CD46 (1q32.2)
SETDB1 (1q21.3)::CD46 (1q32.2)SETDB1 1q21.3::CD46 1q32.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)CD46   6953
LRG (Locus Reference Genomic)LRG_155
Cards
Entrez_Gene (NCBI)CD46    CD46 molecule
AliasesAHUS2; MCP; MIC10; TLX; 
TRA2.10
GeneCards (Weizmann)CD46
Ensembl hg19 (Hinxton)ENSG00000117335 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000117335 [Gene_View]  ENSG00000117335 [Sequence]  chr1:207752054-207795504 [Contig_View]  CD46 [Vega]
ICGC DataPortalENSG00000117335
TCGA cBioPortalCD46
AceView (NCBI)CD46
Genatlas (Paris)CD46
SOURCE (Princeton)CD46
Genetics Home Reference (NIH)CD46
Genomic and cartography
GoldenPath hg38 (UCSC)CD46  -     chr1:207752054-207795504 +  1q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CD46  -     1q32.2   [Description]    (hg19-Feb_2009)
GoldenPathCD46 - 1q32.2 [CytoView hg19]  CD46 - 1q32.2 [CytoView hg38]
ImmunoBaseENSG00000117335
Genome Data Viewer NCBICD46 [Mapview hg19]  
OMIM120920   612922   
Gene and transcription
Genbank (Entrez)A18585 AF209712 AF209713 AF209714 AI589224
RefSeq transcript (Entrez)NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172354 NM_172355 NM_172356 NM_172357 NM_172358 NM_172359 NM_172360 NM_172361
Consensus coding sequences : CCDS (NCBI)CD46
Gene ExpressionCD46 [ NCBI-GEO ]   CD46 [ EBI - ARRAY_EXPRESS ]   CD46 [ SEEK ]   CD46 [ MEM ]
Gene Expression Viewer (FireBrowse)CD46 [ Firebrowse - Broad ]
GenevisibleExpression of CD46 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4179
GTEX Portal (Tissue expression)CD46
Human Protein AtlasENSG00000117335-CD46 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CD46
Human Protein Atlas [tissue]ENSG00000117335-CD46 [tissue]
HPRD00406
Protein Interaction databases
BioGRIDCD46
STRING (EMBL)CD46
ZODIACCD46
Ontologies - Pathways
Litterature
PubMed229 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCD46
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 12:26:30 CET 2022

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