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CD79A (CD79a molecule, immunoglobulin-associated alpha)

Identity

Other namesIGA
MB-1
HGNC (Hugo) CD79A
LocusID (NCBI) 973
Location 19q13.2
Location_base_pair Starts at 42381190 and ends at 42385439 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CD79A   1698
Entrez_Gene (NCBI)CD79A  973  CD79a molecule, immunoglobulin-associated alpha
Cards
GeneCards (Weizmann)CD79A
Ensembl (Hinxton)ENSG00000105369 [Gene_View]  chr19:42381190-42385439 [Contig_View]  CD79A [Vega]
AceView (NCBI)CD79A
Genatlas (Paris)CD79A
SOURCE (Stanford)NM_001783 NM_021601
Genomic and cartography
GoldenPath (UCSC)CD79A  -  19q13.2   chr19:42381190-42385439 +  19q13.2   [Description]    (hg19-Feb_2009)
EnsemblCD79A - 19q13.2 [CytoView]
Mapping of homologs : NCBICD79A [Mapview]
OMIM112205   613501   
Gene and transcription
Genbank (Entrez)AF283770 AK223371 AK315337 BC113731 BC113733
RefSeq transcript (SRS)NM_001783 NM_021601
RefSeq transcript (Entrez)NM_001783 NM_021601
RefSeq genomic (SRS)AC_000151 NC_000019 NC_018930 NG_009619 NT_011109 NW_001838496 NW_004078099
RefSeq genomic (Entrez)AC_000151 NC_000019 NC_018930 NG_009619 NT_011109 NW_001838496 NW_004078099
Consensus coding sequences : CCDS (NCBI)CD79A
Cluster EST : UnigeneHs.631567 [ SRS ] Hs.631567 [ NCBI ]
CGAP (NCI)Hs.631567
Alternative Splicing : Fast-db (Paris)GSHG0045820
Alternative Splicing GalleryENSG00000105369
Gene ExpressionCD79A [ NCBI-GEO ]   CD79A [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP11912 (SRS) P11912 (Uniprot)
NextProtP11912
With graphics : InterProP11912
Splice isoforms : SwissVarP11912(Swissvar)
Domaine pattern : Prosite (SRS)IG_LIKE (PS50835)    ITAM_1 (PS51055)   
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)    ITAM_1 (PS51055)   
Domains : Interpro (SRS)Ig-like    Ig-like_fold    Ig_sub2    Ig_V-set    Phos_immunorcpt_sig_ITAM   
Domains : Interpro (EBI)Ig-like    Ig-like_fold    Ig_sub2    Ig_V-set    Phos_immunorcpt_sig_ITAM   
Related proteins : CluSTrP11912
Domain families : Pfam (SRS)ITAM (PF02189)    V-set (PF07686)   
Domain families : Pfam (Sanger)ITAM (PF02189)    V-set (PF07686)   
Domain families : Pfam (NCBI)pfam02189    pfam07686   
Domain families : Smart (EMBL)IGc2 (SM00408)  ITAM (SM00077)  
DMDM973
Blocks (Seattle)P11912
PDB (SRS)1CV9   
PDB (PDBSum)1CV9   
PDB (IMB)1CV9   
PDB (RSDB)1CV9   
Human Protein AtlasENSG00000105369
HPRD00203
IPIIPI00008473   IPI00218322   
Protein Interaction databases
DIP (DOE-UCLA)P11912
IntAct (EBI)P11912
FunCoupENSG00000105369
REACTOMECD79A
Protein Interaction Database973
BioGRIDCD79A
InParanoidP11912
Interologous Interaction database P11912
IntegromeDBCD79A
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CD79A
SNP (GeneSNP Utah)CD79A
SNP : HGBaseCD79A
Genetic variants : HAPMAPCD79A
Cancer Gene: CensusCD79A 
Somatic Mutations in Cancer : COSMICCD79A 
CONAN: Copy Number AnalysisCD79A 
Mutations and Diseases : HGMDCD79A
OMIM112205    613501   
GENETests112205    613501   
Disease Genetic AssociationCD79A
Huge Navigator CD79A [HugePedia]  CD79A [HugeCancerGEM]
Genomic VariantsCD79A  CD79A [DGVbeta]
snp3D : Map Gene to Disease973
General knowledge
Homologs : HomoloGeneCD79A
Homology/Alignments : Family Browser (UCSC)CD79A
Phylogenetic Trees/Animal Genes : TreeFamCD79A
Chemical/Protein Interactions : CTD973
Chemical/Pharm GKB GenePA26237
Clinical trialCD79A
Cancer Resource (Charite)ENSG00000105369
Ontology : AmiGOtransmembrane signaling receptor activity  multivesicular body  plasma membrane  external side of plasma membrane  integral to membrane  B cell receptor complex  B cell differentiation  B cell proliferation  B cell activation  membrane raft  B cell receptor signaling pathway  
Ontology : EGO-EBItransmembrane signaling receptor activity  multivesicular body  plasma membrane  external side of plasma membrane  integral to membrane  B cell receptor complex  B cell differentiation  B cell proliferation  B cell activation  membrane raft  B cell receptor signaling pathway  
Pathways : BIOCARTACTCF: First Multivalent Nuclear Factor [Genes]    BCR Signaling Pathway [Genes]    B Cell Receptor Complex [Genes]   
Pathways : KEGGB cell receptor signaling pathway
Other databases
Probes
Litterature
PubMed66 Pubmed reference(s) in Entrez
PubGeneCD79A
iHOPCD79A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:19:44 CEST 2013
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