Atlas of Genetics and Cytogenetics in Oncology and Haematology

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CDC123 (cell division cycle 123)

Identity

Alias (NCBI)C10orf7
D123
HGNC (Hugo) CDC123
HGNC Alias symbD123
HGNC Previous nameC10orf7
HGNC Previous namechromosome 10 open reading frame 7
 cell division cycle 123 homolog (S. cerevisiae)
LocusID (NCBI) 8872
Atlas_Id 56084
Location 10p14  [Link to chromosome band 10p14]
Location_base_pair Starts at 12196188 and ends at 12250589 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PRPF18 (10p13) / CDC123 (10p13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CDC123   16827
Cards
Entrez_Gene (NCBI)CDC123    cell division cycle 123
AliasesC10orf7; D123
GeneCards (Weizmann)CDC123
Ensembl hg19 (Hinxton)ENSG00000151465 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000151465 [Gene_View]  ENSG00000151465 [Sequence]  chr10:12196188-12250589 [Contig_View]  CDC123 [Vega]
ICGC DataPortalENSG00000151465
TCGA cBioPortalCDC123
AceView (NCBI)CDC123
Genatlas (Paris)CDC123
SOURCE (Princeton)CDC123
Genetics Home Reference (NIH)CDC123
Genomic and cartography
GoldenPath hg38 (UCSC)CDC123  -     chr10:12196188-12250589 +  10p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CDC123  -     10p14   [Description]    (hg19-Feb_2009)
GoldenPathCDC123 - 10p14 [CytoView hg19]  CDC123 - 10p14 [CytoView hg38]
ImmunoBaseENSG00000151465
genome Data Viewer NCBICDC123 [Mapview hg19]  
OMIM617708   
Gene and transcription
Genbank (Entrez)AK023925 AK225634 AK289362 AK308790 AW006077
RefSeq transcript (Entrez)NM_006023
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CDC123
Alternative Splicing GalleryENSG00000151465
Gene ExpressionCDC123 [ NCBI-GEO ]   CDC123 [ EBI - ARRAY_EXPRESS ]   CDC123 [ SEEK ]   CDC123 [ MEM ]
Gene Expression Viewer (FireBrowse)CDC123 [ Firebrowse - Broad ]
GenevisibleExpression of CDC123 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8872
GTEX Portal (Tissue expression)CDC123
Human Protein AtlasENSG00000151465-CDC123 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75794   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75794  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75794
Splice isoforms : SwissVarO75794
PhosPhoSitePlusO75794
Domains : Interpro (EBI)CDC123   
Domain families : Pfam (Sanger)D123 (PF07065)   
Domain families : Pfam (NCBI)pfam07065   
Conserved Domain (NCBI)CDC123
Blocks (Seattle)CDC123
SuperfamilyO75794
Human Protein Atlas [tissue]ENSG00000151465-CDC123 [tissue]
Peptide AtlasO75794
HPRD12586
IPIIPI00005670   IPI00883779   IPI00515030   IPI00514360   IPI00641917   IPI00514175   IPI00647355   
Protein Interaction databases
DIP (DOE-UCLA)O75794
IntAct (EBI)O75794
BioGRIDCDC123
STRING (EMBL)CDC123
ZODIACCDC123
Ontologies - Pathways
QuickGOO75794
Ontology : AmiGOcytoplasm  cytoplasm  cell cycle arrest  positive regulation of cell proliferation  positive regulation of translational initiation  cell division  eukaryotic translation initiation factor 2 complex assembly  
Ontology : EGO-EBIcytoplasm  cytoplasm  cell cycle arrest  positive regulation of cell proliferation  positive regulation of translational initiation  cell division  eukaryotic translation initiation factor 2 complex assembly  
NDEx NetworkCDC123
Atlas of Cancer Signalling NetworkCDC123
Wikipedia pathwaysCDC123
Orthology - Evolution
OrthoDB8872
GeneTree (enSembl)ENSG00000151465
Phylogenetic Trees/Animal Genes : TreeFamCDC123
HOGENOMO75794
Homologs : HomoloGeneCDC123
Homology/Alignments : Family Browser (UCSC)CDC123
Gene fusions - Rearrangements
Fusion : QuiverCDC123
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCDC123 [hg38]
dbVarCDC123
ClinVarCDC123
MonarchCDC123
1000_GenomesCDC123 
Exome Variant ServerCDC123
GNOMAD BrowserENSG00000151465
Varsome BrowserCDC123
Genomic Variants (DGV)CDC123 [DGVbeta]
DECIPHERCDC123 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCDC123 
Mutations
ICGC Data PortalCDC123 
TCGA Data PortalCDC123 
Broad Tumor PortalCDC123
OASIS PortalCDC123 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCDC123  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCDC123
Mutations and Diseases : HGMDCDC123
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CDC123
DgiDB (Drug Gene Interaction Database)CDC123
DoCM (Curated mutations)CDC123 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CDC123 (select a term)
intoGenCDC123
Cancer3DCDC123(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617708   
Orphanet
DisGeNETCDC123
MedgenCDC123
Genetic Testing Registry CDC123
NextProtO75794 [Medical]
GENETestsCDC123
Target ValidationCDC123
Huge Navigator CDC123 [HugePedia]
ClinGenCDC123
Clinical trials, drugs, therapy
MyCancerGenomeCDC123
Protein Interactions : CTD
Pharm GKB GenePA162382148
PharosO75794
Clinical trialCDC123
Miscellaneous
canSAR (ICR)CDC123 (select the gene name)
HarmonizomeCDC123
DataMed IndexCDC123
Probes
Litterature
PubMed60 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCDC123
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Fri Jan 1 18:09:11 CET 2021
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