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CDC26 (cell division cycle 26)

Identity

Alias_namesC9orf17
chromosome 9 open reading frame 17
cell division cycle 26
cell division cycle 26 homolog (S. cerevisiae)
Alias_symbol (synonym)APC12
ANAPC12
Other alias
HGNC (Hugo) CDC26
LocusID (NCBI) 246184
Atlas_Id 61634
Location 9q32  [Link to chromosome band 9q32]
Location_base_pair Starts at 113267011 and ends at 113275589 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

<-TR> =TZ>
Nomenclature
HGNC (Hugo)CDC26   17839
Cards
Entrez_Gene (NCBI)CDC26  246184  cell division cycle 26
AliasesANAPC12; APC12; C9orf17
GeneCards (Weizmann)CDC26
Ensembl hg19 (Hinxton)ENSG00000176386 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176386 [Gene_View]  chr9:113267011-113275589 [Contig_View]  CDC26 [Vega]
ICGC DataPortalENSG00000176386
TCGA cBioPortalCDC26
AceView (NCBI)CDC26
Genatlas (Paris)CDC26
WikiGenes246184
SOURCE (Princeton)CDC26
Genetics Home Reference (NIH)CDC26
Genomic and cartography
GoldenPath hg38 (UCSC)CDC26  -     chr9:113267011-113275589 -  9q32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CDC26  -     9q32   [Description]    (hg19-Feb_2009)
EnsemblCDC26 - 9q32 [CytoView hg19]  CDC26 - 9q32 [CytoView hg38]
Mapping of homologs : NCBICDC26 [Mapview hg19]  CDC26 [Mapview hg38]
OMIM614533   
Gene and transcription
Genbank (Entrez)AF503918 BC042534 BC066300 BF244254 BQ446788
RefSeq transcript (Entrez)NM_139286
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CDC26
Cluster EST : UnigeneHs.727648 [ NCBI ]
CGAP (NCI)Hs.727648
Alternative Splicing GalleryENSG00000176386
Gene ExpressionCDC26 [ NCBI-GEO ]   CDC26 [ EBI - ARRAY_EXPRESS ]   CDC26 [ SEEK ]   CDC26 [ MEM ]
Gene Expression Viewer (FireBrowse)CDC26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)246184
GTEX Portal (Tissue expression)CDC26
Human Protein AtlasENSG00000176386-CDC26 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NHZ8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NHZ8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NHZ8
Splice isoforms : SwissVarQ8NHZ8
PhosPhoSitePlusQ8NHZ8
Domains : Interpro (EBI)APC_suCDC26   
Domain families : Pfam (Sanger)ANAPC_CDC26 (PF10471)   
Domain families : Pfam (NCBI)pfam10471   
Conserved Domain (NCBI)CDC26
DMDM Disease mutations246184
Blocks (Seattle)CDC26
PDB (SRS)3HYM    4UI9    5A31    5G04    5G05    5KHR    5L9T    5L9U    5LCW   
PDB (PDBSum)3HYM    4UI9    5A31    5G04    5G05    5KHR    5L9T    5L9U    5LCW   
PDB (IMB)3HYM    4UI9    5A31    5G04    5G05    5KHR    5L9T    5L9U    5LCW   
PDB (RSDB)3HYM    4UI9    5A31    5G04    5G05    5KHR    5L9T    5L9U    5LCW   
Structural Biology KnowledgeBase3HYM    4UI9    5A31    5G04    5G05    5KHR    5L9T    5L9U    5LCW   
SCOP (Structural Classification of Proteins)3HYM    4UI9    5A31    5G04    5G05    5KHR    5L9T    5L9U    5LCW   
CATH (Classification of proteins structures)3HYM    4UI9    5A31    5G04    5G05    5KHR    5L9T    5L9U    5LCW   
SuperfamilyQ8NHZ8
Human Protein Atlas [tissue]ENSG00000176386-CDC26 [tissue]
Peptide AtlasQ8NHZ8
HPRD13012
IPIIPI00169387   
Protein Interaction databases
DIP (DOE-UCLA)Q8NHZ8
IntAct (EBI)Q8NHZ8
FunCoupENSG00000176386
BioGRIDCDC26
STRING (EMBL)CDC26
ZODIACCDC26
Ontologies - Pathways
QuickGOQ8NHZ8
Ontology : AmiGOprotein binding  nucleoplasm  anaphase-promoting complex  cytosol  regulation of mitotic metaphase/anaphase transition  anaphase-promoting complex-dependent catabolic process  protein ubiquitination involved in ubiquitin-dependent protein catabolic process  proteasome-mediated ubiquitin-dependent protein catabolic process  cell division  negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition  regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  protein K11-linked ubiquitination  
Ontology : EGO-EBIprotein binding  nucleoplasm  anaphase-promoting complex  cytosol  regulation of mitotic metaphase/anaphase transition  anaphase-promoting complex-dependent catabolic process  protein ubiquitination involved in ubiquitin-dependent protein catabolic process  proteasome-mediated ubiquitin-dependent protein catabolic process  cell division  negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition  regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  protein K11-linked ubiquitination  
Pathways : KEGGCell cycle    Oocyte meiosis    Ubiquitin mediated proteolysis    Progesterone-mediated oocyte maturation    HTLV-I infection   
NDEx NetworkCDC26
Atlas of Cancer Signalling NetworkCDC26
Wikipedia pathwaysCDC26
Orthology - Evolution
OrthoDB246184
GeneTree (enSembl)ENSG00000176386
Phylogenetic Trees/Animal Genes : TreeFamCDC26
HOVERGENQ8NHZ8
HOGENOMQ8NHZ8
Homologs : HomoloGeneCDC26
Homology/Alignments : Family Browser (UCSC)CDC26
Gene fusions - Rearrangements
Tumor Fusion PortalCDC26
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCDC26 [hg38]dbSNP Single Nucleotide Polymorphism (NCBI)CDC26
dbVarCDC26
ClinVarCDC26
1000_GenomesCDC26 
Exome Variant ServerCDC26
ExAC (Exome Aggregation Consortium)ENSG00000176386
GNOMAD BrowserENSG00000176386
Genetic variants : HAPMAP246184
Genomic Variants (DGV)CDC26 [DGVbeta]
DECIPHERCDC26 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCDC26 
Mutations
ICGC Data PortalCDC26 
TCGA Data PortalCDC26 
Broad Tumor PortalCDC26
OASIS PortalCDC26 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCDC26  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCDC26
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CDC26
DgiDB (Drug Gene Interaction Database)CDC26
DoCM (Curated mutations)CDC26 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CDC26 (select a term)
intoGenCDC26
Cancer3DCDC26(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614533   
Orphanet
DisGeNETCDC26
MedgenCDC26
Genetic Testing Registry CDC26
NextProtQ8NHZ8 [Medical]
TSGene246184
GENETestsCDC26
Target ValidationCDC26
Huge Navigator CDC26 [HugePedia]
snp3D : Map Gene to Disease246184
BioCentury BCIQCDC26
ClinGenCDC26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD246184
Chemical/Pharm GKB GenePA25974
Clinical trialCDC26
Miscellaneous
canSAR (ICR)CDC26 (select the gene name)
Probes
Litterature
PubMed41 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCDC26
EVEXCDC26
GoPubMedCDC26
iHOPCDC26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Nov 21 13:19:32 CET 2017

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