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CDC42BPA (CDC42 binding protein kinase alpha)

Identity

Alias (NCBI)MRCK
MRCKA
PK428
HGNC (Hugo) CDC42BPA
HGNC Alias symbMRCKA
PK428
FLJ23347
KIAA0451
MRCK
HGNC Alias namemyotonic dystrophy kinase-related Cdc42-binding kinase
HGNC Previous nameCDC42-binding protein kinase alpha (DMPK-like)
LocusID (NCBI) 8476
Atlas_Id 43197
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 226989865 and ends at 227318492 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CDC42BPA (1q42.13) / C5 (9q33.2)CDC42BPA (1q42.13) / CAMK2A (5q32)CDC42BPA (1q42.13) / CFH (1q31.3)
CDC42BPA (1q42.13) / EPRS (1q41)CDC42BPA (1q42.13) / PLXNA2 (1q32.2)CDC42BPA (1q42.13) / PRKG1 (10q11.23)
CDC42BPA (1q42.13) / RDX (11q22.3)CDC42BPA (1q42.13) / SGK1 (6q23.2)CDC42BPA (1q42.13) / ZNF678 (1q42.13)
FLVCR1 (1q32.3) / CDC42BPA (1q42.13)SLC38A2 (12q13.11) / CDC42BPA (1q42.13)CDC42BPA 1q42.13 / C5 9q33.2
CDC42BPA 1q42.13 / EPRS 1q41CDC42BPA 1q42.13 / PRKG1 10q11.23CDC42BPA 1q42.13 / ZNF678 1q42.13

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(1;11)(q42;q13) CCND1/CDC42BPA


External links

Nomenclature
HGNC (Hugo)CDC42BPA   1737
Cards
Entrez_Gene (NCBI)CDC42BPA    CDC42 binding protein kinase alpha
AliasesMRCK; MRCKA; PK428
GeneCards (Weizmann)CDC42BPA
Ensembl hg19 (Hinxton)ENSG00000143776 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000143776 [Gene_View]  ENSG00000143776 [Sequence]  chr1:226989865-227318492 [Contig_View]  CDC42BPA [Vega]
ICGC DataPortalENSG00000143776
TCGA cBioPortalCDC42BPA
AceView (NCBI)CDC42BPA
Genatlas (Paris)CDC42BPA
SOURCE (Princeton)CDC42BPA
Genetics Home Reference (NIH)CDC42BPA
Genomic and cartography
GoldenPath hg38 (UCSC)CDC42BPA  -     chr1:226989865-227318492 -  1q42.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CDC42BPA  -     1q42.13   [Description]    (hg19-Feb_2009)
GoldenPathCDC42BPA - 1q42.13 [CytoView hg19]  CDC42BPA - 1q42.13 [CytoView hg38]
ImmunoBaseENSG00000143776
Genome Data Viewer NCBICDC42BPA [Mapview hg19]  
OMIM603412   
Gene and transcription
Genbank (Entrez)AB007920 AB208968 AF250871 AJ518975 AJ518976
RefSeq transcript (Entrez)NM_001366010 NM_001366011 NM_001366019 NM_001387550 NM_001394014 NM_003607 NM_014826
Consensus coding sequences : CCDS (NCBI)CDC42BPA
Gene ExpressionCDC42BPA [ NCBI-GEO ]   CDC42BPA [ EBI - ARRAY_EXPRESS ]   CDC42BPA [ SEEK ]   CDC42BPA [ MEM ]
Gene Expression Viewer (FireBrowse)CDC42BPA [ Firebrowse - Broad ]
GenevisibleExpression of CDC42BPA in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8476
GTEX Portal (Tissue expression)CDC42BPA
Human Protein AtlasENSG00000143776-CDC42BPA [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CDC42BPA
Human Protein Atlas [tissue]ENSG00000143776-CDC42BPA [tissue]
HPRD04562
Protein Interaction databases
BioGRIDCDC42BPA
STRING (EMBL)CDC42BPA
ZODIACCDC42BPA
Ontologies - Pathways
Litterature
PubMed61 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCDC42BPA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:03:08 CEST 2021

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