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CDC7 (cell division cycle 7)

Identity

Alias_namesCDC7L1
CDC7 (cell division cycle 7, S. cerevisiae, homolog)-like 1
CDC7 cell division cycle 7 (S. cerevisiae)
cell division cycle 7 (S. cerevisiae)
cell division cycle 7 homolog (S. cerevisiae)
Alias_symbol (synonym)Hsk1
huCdc7
HsCdc7
Other aliasHsCDC7
huCDC7
HGNC (Hugo) CDC7
LocusID (NCBI) 8317
Atlas_Id 40015
Location 1p22.1  [Link to chromosome band 1p22]
Location_base_pair Starts at 91500847 and ends at 91525764 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CDC7   1745
Cards
Entrez_Gene (NCBI)CDC7  8317  cell division cycle 7
AliasesCDC7L1; HsCDC7; Hsk1; huCDC7
GeneCards (Weizmann)CDC7
Ensembl hg19 (Hinxton)ENSG00000097046 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000097046 [Gene_View]  chr1:91500847-91525764 [Contig_View]  CDC7 [Vega]
ICGC DataPortalENSG00000097046
TCGA cBioPortalCDC7
AceView (NCBI)CDC7
Genatlas (Paris)CDC7
WikiGenes8317
SOURCE (Princeton)CDC7
Genetics Home Reference (NIH)CDC7
Genomic and cartography
GoldenPath hg38 (UCSC)CDC7  -     chr1:91500847-91525764 +  1p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CDC7  -     1p22.1   [Description]    (hg19-Feb_2009)
EnsemblCDC7 - 1p22.1 [CytoView hg19]  CDC7 - 1p22.1 [CytoView hg38]
Mapping of homologs : NCBICDC7 [Mapview hg19]  CDC7 [Mapview hg38]
OMIM603311   
Gene and transcription
Genbank (Entrez)AB003698 AB209337 AF005209 AF015592 AI672674
RefSeq transcript (Entrez)NM_001134419 NM_001134420 NM_003503
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CDC7
Cluster EST : UnigeneHs.533573 [ NCBI ]
CGAP (NCI)Hs.533573
Alternative Splicing GalleryENSG00000097046
Gene ExpressionCDC7 [ NCBI-GEO ]   CDC7 [ EBI - ARRAY_EXPRESS ]   CDC7 [ SEEK ]   CDC7 [ MEM ]
Gene Expression Viewer (FireBrowse)CDC7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8317
GTEX Portal (Tissue expression)CDC7
Protein : pattern, domain, 3D structure
UniProt/SwissProtO00311   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO00311  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO00311
Splice isoforms : SwissVarO00311
PhosPhoSitePlusO00311
Domaine pattern : Prosite (Expaxy)PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (EBI)Kinase-like_dom    Prot_kinase_dom    Protein_kinase_ATP_BS    Ser/Thr_kinase_AS   
Domain families : Pfam (Sanger)Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam00069   
Domain families : Smart (EMBL)S_TKc (SM00220)  
Conserved Domain (NCBI)CDC7
DMDM Disease mutations8317
Blocks (Seattle)CDC7
PDB (SRS)4F99    4F9A    4F9B    4F9C   
PDB (PDBSum)4F99    4F9A    4F9B    4F9C   
PDB (IMB)4F99    4F9A    4F9B    4F9C   
PDB (RSDB)4F99    4F9A    4F9B    4F9C   
Structural Biology KnowledgeBase4F99    4F9A    4F9B    4F9C   
SCOP (Structural Classification of Proteins)4F99    4F9A    4F9B    4F9C   
CATH (Classification of proteins structures)4F99    4F9A    4F9B    4F9C   
SuperfamilyO00311
Human Protein AtlasENSG00000097046
Peptide AtlasO00311
HPRD10345
IPIIPI00448121   IPI00922848   IPI00428489   IPI01018245   IPI00642751   
Protein Interaction databases
DIP (DOE-UCLA)O00311
IntAct (EBI)O00311
FunCoupENSG00000097046
BioGRIDCDC7
STRING (EMBL)CDC7
ZODIACCDC7
Ontologies - Pathways
QuickGOO00311
Ontology : AmiGOG1/S transition of mitotic cell cycle  double-strand break repair via break-induced replication  protein kinase activity  protein serine/threonine kinase activity  protein binding  ATP binding  nucleus  nucleoplasm  nucleoplasm  cytoplasm  DNA replication  DNA replication initiation  phagocytosis  positive regulation of cell proliferation  regulation of cell shape  positive regulation of nuclear cell cycle DNA replication  positive regulation of G2/M transition of mitotic cell cycle  kinase activity  peptidyl-serine phosphorylation  cell cycle phase transition  intercellular bridge  metal ion binding  cell division  mitotic spindle  
Ontology : EGO-EBIG1/S transition of mitotic cell cycle  double-strand break repair via break-induced replication  protein kinase activity  protein serine/threonine kinase activity  protein binding  ATP binding  nucleus  nucleoplasm  nucleoplasm  cytoplasm  DNA replication  DNA replication initiation  phagocytosis  positive regulation of cell proliferation  regulation of cell shape  positive regulation of nuclear cell cycle DNA replication  positive regulation of G2/M transition of mitotic cell cycle  kinase activity  peptidyl-serine phosphorylation  cell cycle phase transition  intercellular bridge  metal ion binding  cell division  mitotic spindle  
Pathways : KEGGCell cycle   
NDEx NetworkCDC7
Atlas of Cancer Signalling NetworkCDC7
Wikipedia pathwaysCDC7
Orthology - Evolution
OrthoDB8317
GeneTree (enSembl)ENSG00000097046
Phylogenetic Trees/Animal Genes : TreeFamCDC7
HOVERGENO00311
HOGENOMO00311
Homologs : HomoloGeneCDC7
Homology/Alignments : Family Browser (UCSC)CDC7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCDC7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CDC7
dbVarCDC7
ClinVarCDC7
1000_GenomesCDC7 
Exome Variant ServerCDC7
ExAC (Exome Aggregation Consortium)CDC7 (select the gene name)
Genetic variants : HAPMAP8317
Genomic Variants (DGV)CDC7 [DGVbeta]
DECIPHERCDC7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCDC7 
Mutations
ICGC Data PortalCDC7 
TCGA Data PortalCDC7 
Broad Tumor PortalCDC7
OASIS PortalCDC7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCDC7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCDC7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CDC7
DgiDB (Drug Gene Interaction Database)CDC7
DoCM (Curated mutations)CDC7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CDC7 (select a term)
intoGenCDC7
Cancer3DCDC7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603311   
Orphanet
MedgenCDC7
Genetic Testing Registry CDC7
NextProtO00311 [Medical]
TSGene8317
GENETestsCDC7
Target ValidationCDC7
Huge Navigator CDC7 [HugePedia]
snp3D : Map Gene to Disease8317
BioCentury BCIQCDC7
ClinGenCDC7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8317
Chemical/Pharm GKB GenePA26272
Clinical trialCDC7
Miscellaneous
canSAR (ICR)CDC7 (select the gene name)
Probes
Litterature
PubMed74 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCDC7
EVEXCDC7
GoPubMedCDC7
iHOPCDC7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:49:20 CEST 2017

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