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CDCA2 (cell division cycle associated 2)

Identity

Alias_namesregulatory subunit 81
Alias_symbol (synonym)Repo-Man
PPP1R81
Other alias
HGNC (Hugo) CDCA2
LocusID (NCBI) 157313
Atlas_Id 53500
Location 8p21.2  [Link to chromosome band 8p21]
Location_base_pair Starts at 25458931 and ends at 25507917 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CDCA2 (8p21.2) / ADAM28 (8p21.2)CDCA2 8p21.2 / ADAM28 8p21.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CDCA2   14623
Cards
Entrez_Gene (NCBI)CDCA2  157313  cell division cycle associated 2
AliasesPPP1R81; Repo-Man
GeneCards (Weizmann)CDCA2
Ensembl hg19 (Hinxton)ENSG00000184661 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184661 [Gene_View]  chr8:25458931-25507917 [Contig_View]  CDCA2 [Vega]
ICGC DataPortalENSG00000184661
TCGA cBioPortalCDCA2
AceView (NCBI)CDCA2
Genatlas (Paris)CDCA2
WikiGenes157313
SOURCE (Princeton)CDCA2
Genetics Home Reference (NIH)CDCA2
Genomic and cartography
GoldenPath hg38 (UCSC)CDCA2  -     chr8:25458931-25507917 +  8p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CDCA2  -     8p21.2   [Description]    (hg19-Feb_2009)
EnsemblCDCA2 - 8p21.2 [CytoView hg19]  CDCA2 - 8p21.2 [CytoView hg38]
Mapping of homologs : NCBICDCA2 [Mapview hg19]  CDCA2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA678348 AI022757 AK092164 AK098670 AK292505
RefSeq transcript (Entrez)NM_001317906 NM_001317907 NM_152562
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CDCA2
Cluster EST : UnigeneHs.33366 [ NCBI ]
CGAP (NCI)Hs.33366
Alternative Splicing GalleryENSG00000184661
Gene ExpressionCDCA2 [ NCBI-GEO ]   CDCA2 [ EBI - ARRAY_EXPRESS ]   CDCA2 [ SEEK ]   CDCA2 [ MEM ]
Gene Expression Viewer (FireBrowse)CDCA2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)157313
GTEX Portal (Tissue expression)CDCA2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ69YH5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ69YH5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ69YH5
Splice isoforms : SwissVarQ69YH5
PhosPhoSitePlusQ69YH5
Domains : Interpro (EBI)CDCA2    PP1-bd   
Domain families : Pfam (Sanger)PP1_bind (PF15276)   
Domain families : Pfam (NCBI)pfam15276   
Conserved Domain (NCBI)CDCA2
DMDM Disease mutations157313
Blocks (Seattle)CDCA2
PDB (SRS)5INB    5IOH    5SW9   
PDB (PDBSum)5INB    5IOH    5SW9   
PDB (IMB)5INB    5IOH    5SW9   
PDB (RSDB)5INB    5IOH    5SW9   
Structural Biology KnowledgeBase5INB    5IOH    5SW9   
SCOP (Structural Classification of Proteins)5INB    5IOH    5SW9   
CATH (Classification of proteins structures)5INB    5IOH    5SW9   
SuperfamilyQ69YH5
Human Protein AtlasENSG00000184661
Peptide AtlasQ69YH5
HPRD13014
IPIIPI00465387   IPI00845514   IPI00973127   
Protein Interaction databases
DIP (DOE-UCLA)Q69YH5
IntAct (EBI)Q69YH5
FunCoupENSG00000184661
BioGRIDCDCA2
STRING (EMBL)CDCA2
ZODIACCDCA2
Ontologies - Pathways
QuickGOQ69YH5
Ontology : AmiGOnucleoplasm  chromosome  cytosol  cell cycle  chromosome segregation  positive regulation of protein dephosphorylation  cell division  
Ontology : EGO-EBInucleoplasm  chromosome  cytosol  cell cycle  chromosome segregation  positive regulation of protein dephosphorylation  cell division  
NDEx NetworkCDCA2
Atlas of Cancer Signalling NetworkCDCA2
Wikipedia pathwaysCDCA2
Orthology - Evolution
OrthoDB157313
GeneTree (enSembl)ENSG00000184661
Phylogenetic Trees/Animal Genes : TreeFamCDCA2
HOVERGENQ69YH5
HOGENOMQ69YH5
Homologs : HomoloGeneCDCA2
Homology/Alignments : Family Browser (UCSC)CDCA2
Gene fusions - Rearrangements
Fusion : MitelmanCDCA2/ADAM28 [8p21.2/8p21.2]  
Fusion: TCGACDCA2 8p21.2 ADAM28 8p21.2 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCDCA2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CDCA2
dbVarCDCA2
ClinVarCDCA2
1000_GenomesCDCA2 
Exome Variant ServerCDCA2
ExAC (Exome Aggregation Consortium)CDCA2 (select the gene name)
Genetic variants : HAPMAP157313
Genomic Variants (DGV)CDCA2 [DGVbeta]
DECIPHERCDCA2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCDCA2 
Mutations
ICGC Data PortalCDCA2 
TCGA Data PortalCDCA2 
Broad Tumor PortalCDCA2
OASIS PortalCDCA2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCDCA2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCDCA2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CDCA2
DgiDB (Drug Gene Interaction Database)CDCA2
DoCM (Curated mutations)CDCA2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CDCA2 (select a term)
intoGenCDCA2
Cancer3DCDCA2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCDCA2
Genetic Testing Registry CDCA2
NextProtQ69YH5 [Medical]
TSGene157313
GENETestsCDCA2
Target ValidationCDCA2
Huge Navigator CDCA2 [HugePedia]
snp3D : Map Gene to Disease157313
BioCentury BCIQCDCA2
ClinGenCDCA2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD157313
Chemical/Pharm GKB GenePA26275
Clinical trialCDCA2
Miscellaneous
canSAR (ICR)CDCA2 (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCDCA2
EVEXCDCA2
GoPubMedCDCA2
iHOPCDCA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:57:23 CEST 2017

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