CDH19 (cadherin 19, type 2)

Identity

Other names	CDH7
	CDH7L2
HGNC	CDH19
Location	18q22.1
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CDH19   1758
Entrez_Gene	CDH19  28513  cadherin 19, type 2
	Cards
GeneCards	CDH19
Ensembl	CDH19 [Search_View]   ENSG00000071991 [Gene_View]
Genatlas	CDH19
GeneLynx	CDH19
eGenome	CDH19
euGene	28513
	Genomic and cartography
GoldenPath	CDH19  -  18q22.1   chr18:62322301-62422196 -  18q22.1   [Description]    (hg18-March_2006)
Ensembl	CDH19 - 18q22.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CDH19
	Gene and transcription
Genbank	AA331759 [ ENTREZ ]
Genbank	AF047826 [ ENTREZ ]
Genbank	AJ007607 [ ENTREZ ]
Genbank	AK315257 [ ENTREZ ]
Genbank	AY358654 [ ENTREZ ]
RefSeq	NM_021153 [ SRS ]    NM_021153 [ ENTREZ ]
RefSeq	AC_000061 [ SRS ]    AC_000061 [ ENTREZ ]
RefSeq	AC_000150 [ SRS ]    AC_000150 [ ENTREZ ]
RefSeq	NC_000018 [ SRS ]    NC_000018 [ ENTREZ ]
RefSeq	NT_025028 [ SRS ]    NT_025028 [ ENTREZ ]
RefSeq	NW_001838469 [ SRS ]    NW_001838469 [ ENTREZ ]
RefSeq	NW_927106 [ SRS ]    NW_927106 [ ENTREZ ]
AceView	CDH19 AceView - NCBI
Unigene	Hs.42771 [ SRS ]    Hs.42771 [ NCBI ]     HS42771 [ spliceNest ]
Fast-db	5749 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O60574 [ SRS]    O60574 [ EXPASY ]     O60574 [ INTERPRO ]     O60574 [ UNIPROT ]
Prosite	PS50268 CADHERIN_2 [ SRS ]    PS50268 CADHERIN_2 [ Expasy ]
Interpro	IPR002126 Cadherin [ SRS ]    IPR002126 Cadherin [ EBI ]
Interpro	IPR000233 Cadherin_C_term [ SRS ]    IPR000233 Cadherin_C_term [ EBI ]
CluSTr	O60574
Pfam	PF00028 Cadherin [ SRS ]    PF00028 Cadherin [ Sanger ]    pfam00028 [ NCBI-CDD ]
Pfam	PF01049 Cadherin_C [ SRS ]    PF01049 Cadherin_C [ Sanger ]    pfam01049 [ NCBI-CDD ]
Smart	SM00112 CA [EMBL]
Blocks	O60574
HPRD	04311
	Protein Interaction databases
DIP	O60574
IntAct	O60574
	Polymorphism : SNP, mutations, diseases
OMIM	603016    [ map ]
GENECLINICS	603016
SNP	CDH19 [dbSNP-NCBI]
SNP	NM_021153 [SNP-NCI]
SNP	CDH19 [GeneSNPs - Utah]  CDH19] [HGBASE - SRS]
HAPMAP	CDH19 [HAPMAP]
HGMD	CDH19
	General knowledge
Family Browser	CDH19 [UCSC Family Browser]
SOURCE	NM_021153
SMD	Hs.42771
SAGE	Hs.42771
GO	calcium ion binding [Amigo]  calcium ion binding
GO	protein binding [Amigo]  protein binding
GO	plasma membrane [Amigo]  plasma membrane
GO	homophilic cell adhesion [Amigo]  homophilic cell adhesion
GO	homophilic cell adhesion [Amigo]  homophilic cell adhesion
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
PubGene	CDH19
TreeFam	CDH19
CTD	28513 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CDH19 Related clones (RZPD - Berlin)
	PubMed
PubMed	7 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:04:24 2008