Atlas of Genetics and Cytogenetics in Oncology and Haematology

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CDH23-AS1 (CDH23 antisense RNA 1)


Alias (NCBI)C10orf106
HGNC (Hugo) CDH23-AS1
LocusID (NCBI) 102723377
Atlas_Id 78661
Location 10q22.1  [Link to chromosome band 10q22]
Location_base_pair Starts at 71508153 and ends at 71511920 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)CDH23-AS1   31433
Entrez_Gene (NCBI)CDH23-AS1    CDH23 antisense RNA 1
AliasesC10orf106; NCRNA00223; bA327E2.3
GeneCards (Weizmann)CDH23-AS1
Ensembl hg19 (Hinxton)ENSG00000223817 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223817 [Gene_View]  ENSG00000223817 [Sequence]  chr10:71508153-71511920 [Contig_View]  CDH23-AS1 [Vega]
ICGC DataPortalENSG00000223817
TCGA cBioPortalCDH23-AS1
AceView (NCBI)CDH23-AS1
Genatlas (Paris)CDH23-AS1
SOURCE (Princeton)CDH23-AS1
Genetics Home Reference (NIH)CDH23-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CDH23-AS1  -     chr10:71508153-71511920 -  10q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CDH23-AS1  -     10q22.1   [Description]    (hg19-Feb_2009)
GoldenPathCDH23-AS1 - 10q22.1 [CytoView hg19]  CDH23-AS1 - 10q22.1 [CytoView hg38]
Genome Data Viewer NCBICDH23-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BX103495
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)CDH23-AS1
Gene ExpressionCDH23-AS1 [ NCBI-GEO ]   CDH23-AS1 [ EBI - ARRAY_EXPRESS ]   CDH23-AS1 [ SEEK ]   CDH23-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CDH23-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of CDH23-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102723377
GTEX Portal (Tissue expression)CDH23-AS1
Human Protein AtlasENSG00000223817-CDH23-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CDH23-AS1
Human Protein Atlas [tissue]ENSG00000223817-CDH23-AS1 [tissue]
Protein Interaction databases
Ontologies - Pathways
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:45:33 CEST 2021

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