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CDIPT (CDP-diacylglycerol--inositol 3-phosphatidyltransferase)

Identity

Alias_namesCDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
Alias_symbol (synonym)PIS1
PIS
Other alias
HGNC (Hugo) CDIPT
LocusID (NCBI) 10423
Atlas_Id 51613
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 29858356 and ends at 29863288 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CDIPT   1769
Cards
Entrez_Gene (NCBI)CDIPT  10423  CDP-diacylglycerol--inositol 3-phosphatidyltransferase
AliasesPIS; PIS1
GeneCards (Weizmann)CDIPT
Ensembl hg19 (Hinxton)ENSG00000103502 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000103502 [Gene_View]  chr16:29858356-29863288 [Contig_View]  CDIPT [Vega]
ICGC DataPortalENSG00000103502
TCGA cBioPortalCDIPT
AceView (NCBI)CDIPT
Genatlas (Paris)CDIPT
WikiGenes10423
SOURCE (Princeton)CDIPT
Genetics Home Reference (NIH)CDIPT
Genomic and cartography
GoldenPath hg38 (UCSC)CDIPT  -     chr16:29858356-29863288 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CDIPT  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblCDIPT - 16p11.2 [CytoView hg19]  CDIPT - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBICDIPT [Mapview hg19]  CDIPT [Mapview hg38]
OMIM605893   
Gene and transcription
Genbank (Entrez)AF014807 AI696848 AK094468 AK097691 AK131227
RefSeq transcript (Entrez)NM_001286585 NM_001286586 NM_006319 NM_145752
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CDIPT
Cluster EST : UnigeneHs.121549 [ NCBI ]
CGAP (NCI)Hs.121549
Alternative Splicing GalleryENSG00000103502
Gene ExpressionCDIPT [ NCBI-GEO ]   CDIPT [ EBI - ARRAY_EXPRESS ]   CDIPT [ SEEK ]   CDIPT [ MEM ]
Gene Expression Viewer (FireBrowse)CDIPT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10423
GTEX Portal (Tissue expression)CDIPT
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14735   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14735  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14735
Splice isoforms : SwissVarO14735
Catalytic activity : Enzyme2.7.8.11 [ Enzyme-Expasy ]   2.7.8.112.7.8.11 [ IntEnz-EBI ]   2.7.8.11 [ BRENDA ]   2.7.8.11 [ KEGG ]   
PhosPhoSitePlusO14735
Domaine pattern : Prosite (Expaxy)CDP_ALCOHOL_P_TRANSF (PS00379)   
Domains : Interpro (EBI)CDP-OH_P_trans    CDP_diag_ino_3_P_euk   
Domain families : Pfam (Sanger)CDP-OH_P_transf (PF01066)   
Domain families : Pfam (NCBI)pfam01066   
Conserved Domain (NCBI)CDIPT
DMDM Disease mutations10423
Blocks (Seattle)CDIPT
SuperfamilyO14735
Human Protein AtlasENSG00000103502
Peptide AtlasO14735
HPRD12063
IPIIPI00645518   IPI00442183   IPI00910287   IPI00953187   
Protein Interaction databases
DIP (DOE-UCLA)O14735
IntAct (EBI)O14735
FunCoupENSG00000103502
BioGRIDCDIPT
STRING (EMBL)CDIPT
ZODIACCDIPT
Ontologies - Pathways
QuickGOO14735
Ontology : AmiGOGolgi membrane  CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity  CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity  protein binding  endoplasmic reticulum membrane  Golgi apparatus  plasma membrane  phosphatidylinositol biosynthetic process  phosphatidylinositol biosynthetic process  membrane  integral component of membrane  diacylglycerol binding  manganese ion binding  carbohydrate binding  alcohol binding  CDP-diacylglycerol metabolic process  
Ontology : EGO-EBIGolgi membrane  CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity  CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity  protein binding  endoplasmic reticulum membrane  Golgi apparatus  plasma membrane  phosphatidylinositol biosynthetic process  phosphatidylinositol biosynthetic process  membrane  integral component of membrane  diacylglycerol binding  manganese ion binding  carbohydrate binding  alcohol binding  CDP-diacylglycerol metabolic process  
Pathways : KEGGInositol phosphate metabolism    Glycerophospholipid metabolism    Phosphatidylinositol signaling system   
NDEx NetworkCDIPT
Atlas of Cancer Signalling NetworkCDIPT
Wikipedia pathwaysCDIPT
Orthology - Evolution
OrthoDB10423
GeneTree (enSembl)ENSG00000103502
Phylogenetic Trees/Animal Genes : TreeFamCDIPT
HOVERGENO14735
HOGENOMO14735
Homologs : HomoloGeneCDIPT
Homology/Alignments : Family Browser (UCSC)CDIPT
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCDIPT [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CDIPT
dbVarCDIPT
ClinVarCDIPT
1000_GenomesCDIPT 
Exome Variant ServerCDIPT
ExAC (Exome Aggregation Consortium)CDIPT (select the gene name)
Genetic variants : HAPMAP10423
Genomic Variants (DGV)CDIPT [DGVbeta]
DECIPHERCDIPT [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCDIPT 
Mutations
ICGC Data PortalCDIPT 
TCGA Data PortalCDIPT 
Broad Tumor PortalCDIPT
OASIS PortalCDIPT [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCDIPT  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCDIPT
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CDIPT
DgiDB (Drug Gene Interaction Database)CDIPT
DoCM (Curated mutations)CDIPT (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CDIPT (select a term)
intoGenCDIPT
Cancer3DCDIPT(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605893   
Orphanet
MedgenCDIPT
Genetic Testing Registry CDIPT
NextProtO14735 [Medical]
TSGene10423
GENETestsCDIPT
Target ValidationCDIPT
Huge Navigator CDIPT [HugePedia]
snp3D : Map Gene to Disease10423
BioCentury BCIQCDIPT
ClinGenCDIPT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10423
Chemical/Pharm GKB GenePA26306
Clinical trialCDIPT
Miscellaneous
canSAR (ICR)CDIPT (select the gene name)
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCDIPT
EVEXCDIPT
GoPubMedCDIPT
iHOPCDIPT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:27:43 CEST 2017

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