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CDIPT (CDP-diacylglycerol--inositol 3-phosphatidyltransferase)

Identity

Alias (NCBI)PIS
PIS1
HGNC (Hugo) CDIPT
HGNC Alias symbPIS1
PIS
HGNC Alias namephosphatidylinositol synthase
HGNC Previous nameCDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
LocusID (NCBI) 10423
Atlas_Id 51613
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 29858357 and ends at 29863226 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CDIPT   1769
Cards
Entrez_Gene (NCBI)CDIPT    CDP-diacylglycerol--inositol 3-phosphatidyltransferase
AliasesPIS; PIS1
GeneCards (Weizmann)CDIPT
Ensembl hg19 (Hinxton)ENSG00000103502 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000103502 [Gene_View]  ENSG00000103502 [Sequence]  chr16:29858357-29863226 [Contig_View]  CDIPT [Vega]
ICGC DataPortalENSG00000103502
TCGA cBioPortalCDIPT
AceView (NCBI)CDIPT
Genatlas (Paris)CDIPT
SOURCE (Princeton)CDIPT
Genetics Home Reference (NIH)CDIPT
Genomic and cartography
GoldenPath hg38 (UCSC)CDIPT  -     chr16:29858357-29863226 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CDIPT  -     16p11.2   [Description]    (hg19-Feb_2009)
GoldenPathCDIPT - 16p11.2 [CytoView hg19]  CDIPT - 16p11.2 [CytoView hg38]
ImmunoBaseENSG00000103502
Genome Data Viewer NCBICDIPT [Mapview hg19]  
OMIM605893   
Gene and transcription
Genbank (Entrez)AF014807 AI696848 AK094468 AK097691 AK131227
RefSeq transcript (Entrez)NM_001286585 NM_001286586 NM_006319 NM_145752
Consensus coding sequences : CCDS (NCBI)CDIPT
Gene ExpressionCDIPT [ NCBI-GEO ]   CDIPT [ EBI - ARRAY_EXPRESS ]   CDIPT [ SEEK ]   CDIPT [ MEM ]
Gene Expression Viewer (FireBrowse)CDIPT [ Firebrowse - Broad ]
GenevisibleExpression of CDIPT in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10423
GTEX Portal (Tissue expression)CDIPT
Human Protein AtlasENSG00000103502-CDIPT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14735   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14735  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14735
PhosPhoSitePlusO14735
Domaine pattern : Prosite (Expaxy)CDP_ALCOHOL_P_TRANSF (PS00379)   
Domains : Interpro (EBI)CDP-OH_P_trans    CDP-OH_PTrfase_TM_dom    CDP_diag_ino_3_P_euk   
Domain families : Pfam (Sanger)CDP-OH_P_transf (PF01066)   
Domain families : Pfam (NCBI)pfam01066   
Conserved Domain (NCBI)CDIPT
SuperfamilyO14735
AlphaFold pdb e-kbO14735   
Human Protein Atlas [tissue]ENSG00000103502-CDIPT [tissue]
HPRD12063
Protein Interaction databases
DIP (DOE-UCLA)O14735
IntAct (EBI)O14735
BioGRIDCDIPT
STRING (EMBL)CDIPT
ZODIACCDIPT
Ontologies - Pathways
QuickGOO14735
Ontology : AmiGOCDP-diacylglycerol-inositol 3-phosphatidyltransferase activity  CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity  protein binding  endoplasmic reticulum membrane  Golgi apparatus  plasma membrane  phosphatidylinositol biosynthetic process  phosphatidylinositol biosynthetic process  phosphatidylinositol biosynthetic process  membrane  integral component of membrane  diacylglycerol binding  manganese ion binding  carbohydrate binding  alcohol binding  CDP-diacylglycerol metabolic process  
Ontology : EGO-EBICDP-diacylglycerol-inositol 3-phosphatidyltransferase activity  CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity  protein binding  endoplasmic reticulum membrane  Golgi apparatus  plasma membrane  phosphatidylinositol biosynthetic process  phosphatidylinositol biosynthetic process  phosphatidylinositol biosynthetic process  membrane  integral component of membrane  diacylglycerol binding  manganese ion binding  carbohydrate binding  alcohol binding  CDP-diacylglycerol metabolic process  
Pathways : KEGGInositol phosphate metabolism    Glycerophospholipid metabolism    Phosphatidylinositol signaling system   
NDEx NetworkCDIPT
Atlas of Cancer Signalling NetworkCDIPT
Wikipedia pathwaysCDIPT
Orthology - Evolution
OrthoDB10423
GeneTree (enSembl)ENSG00000103502
Phylogenetic Trees/Animal Genes : TreeFamCDIPT
Homologs : HomoloGeneCDIPT
Homology/Alignments : Family Browser (UCSC)CDIPT
Gene fusions - Rearrangements
Fusion : QuiverCDIPT
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCDIPT [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CDIPT
dbVarCDIPT
ClinVarCDIPT
MonarchCDIPT
1000_GenomesCDIPT 
Exome Variant ServerCDIPT
GNOMAD BrowserENSG00000103502
Varsome BrowserCDIPT
ACMGCDIPT variants
VarityO14735
Genomic Variants (DGV)CDIPT [DGVbeta]
DECIPHERCDIPT [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCDIPT 
Mutations
ICGC Data PortalCDIPT 
TCGA Data PortalCDIPT 
Broad Tumor PortalCDIPT
OASIS PortalCDIPT [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCDIPT  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCDIPT
Mutations and Diseases : HGMDCDIPT
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCDIPT
DgiDB (Drug Gene Interaction Database)CDIPT
DoCM (Curated mutations)CDIPT
CIViC (Clinical Interpretations of Variants in Cancer)CDIPT
Cancer3DCDIPT
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605893   
Orphanet
DisGeNETCDIPT
MedgenCDIPT
Genetic Testing Registry CDIPT
NextProtO14735 [Medical]
GENETestsCDIPT
Target ValidationCDIPT
Huge Navigator CDIPT [HugePedia]
ClinGenCDIPT
Clinical trials, drugs, therapy
MyCancerGenomeCDIPT
Protein Interactions : CTDCDIPT
Pharm GKB GenePA26306
PharosO14735
Clinical trialCDIPT
Miscellaneous
canSAR (ICR)CDIPT
HarmonizomeCDIPT
DataMed IndexCDIPT
Probes
Litterature
PubMed48 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCDIPT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:03:15 CEST 2021

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