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CDKN2A-AS1 (-)

Identity

Alias_namesC9orf53
chromosome 9 open reading frame 53
Alias_symbol (synonym)bA149I2.3
Other alias-
HGNC (Hugo) -
LocusID (NCBI) 51198
Atlas_Id 54186
Location -  [Link to chromosome band ]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
EIF4EBP1 (8p11.23) / CDKN2A-AS1 (9p21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Lung: Translocations in Squamous Cell Carcinoma


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)CDKN2A-AS1  51198  -
Aliases
GeneCards (Weizmann)CDKN2A-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  CDKN2A-AS1 [Vega]
TCGA cBioPortalCDKN2A-AS1
AceView (NCBI)CDKN2A-AS1
Genatlas (Paris)CDKN2A-AS1
WikiGenes51198
SOURCE (Princeton)CDKN2A-AS1
Genetics Home Reference (NIH)CDKN2A-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CDKN2A-AS1  -  
GoldenPath hg19 (UCSC)CDKN2A-AS1  -  
EnsemblCDKN2A-AS1 - [CytoView hg19]  CDKN2A-AS1 - [CytoView hg38]
Mapping of homologs : NCBICDKN2A-AS1 [Mapview hg19]  CDKN2A-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CDKN2A-AS1
Gene ExpressionCDKN2A-AS1 [ NCBI-GEO ]   CDKN2A-AS1 [ EBI - ARRAY_EXPRESS ]   CDKN2A-AS1 [ SEEK ]   CDKN2A-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CDKN2A-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)51198
GTEX Portal (Tissue expression)CDKN2A-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CDKN2A-AS1
DMDM Disease mutations51198
Blocks (Seattle)CDKN2A-AS1
Protein Interaction databases
BioGRIDCDKN2A-AS1
STRING (EMBL)CDKN2A-AS1
ZODIACCDKN2A-AS1
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease51198
BioCentury BCIQCDKN2A-AS1
ClinGenCDKN2A-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51198
Clinical trialCDKN2A-AS1
Miscellaneous
canSAR (ICR)CDKN2A-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineCDKN2A-AS1
EVEXCDKN2A-AS1
GoPubMedCDKN2A-AS1
iHOPCDKN2A-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Aug 27 11:14:37 CEST 2018

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