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CDKN2AIPNL (CDKN2A interacting protein N-terminal like)

Identity

Alias_symbol (synonym)MGC13017
Other alias-
HGNC (Hugo) CDKN2AIPNL
LocusID (NCBI) 91368
Atlas_Id 61655
Location 5q31.1  [Link to chromosome band 5q31]
Location_base_pair Starts at 134402065 and ends at 134411907 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CDKN2AIPNL   30545
Cards
Entrez_Gene (NCBI)CDKN2AIPNL  91368  CDKN2A interacting protein N-terminal like
Aliases
GeneCards (Weizmann)CDKN2AIPNL
Ensembl hg19 (Hinxton)ENSG00000237190 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237190 [Gene_View]  chr5:134402065-134411907 [Contig_View]  CDKN2AIPNL [Vega]
ICGC DataPortalENSG00000237190
TCGA cBioPortalCDKN2AIPNL
AceView (NCBI)CDKN2AIPNL
Genatlas (Paris)CDKN2AIPNL
WikiGenes91368
SOURCE (Princeton)CDKN2AIPNL
Genetics Home Reference (NIH)CDKN2AIPNL
Genomic and cartography
GoldenPath hg38 (UCSC)CDKN2AIPNL  -     chr5:134402065-134411907 -  5q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CDKN2AIPNL  -     5q31.1   [Description]    (hg19-Feb_2009)
EnsemblCDKN2AIPNL - 5q31.1 [CytoView hg19]  CDKN2AIPNL - 5q31.1 [CytoView hg38]
Mapping of homologs : NCBICDKN2AIPNL [Mapview hg19]  CDKN2AIPNL [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC008293 BC018086 BM997508 DB480185 JF432561
RefSeq transcript (Entrez)NM_080656
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CDKN2AIPNL
Cluster EST : UnigeneHs.156506 [ NCBI ]
CGAP (NCI)Hs.156506
Alternative Splicing GalleryENSG00000237190
Gene ExpressionCDKN2AIPNL [ NCBI-GEO ]   CDKN2AIPNL [ EBI - ARRAY_EXPRESS ]   CDKN2AIPNL [ SEEK ]   CDKN2AIPNL [ MEM ]
Gene Expression Viewer (FireBrowse)CDKN2AIPNL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)91368
GTEX Portal (Tissue expression)CDKN2AIPNL
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96HQ2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96HQ2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96HQ2
Splice isoforms : SwissVarQ96HQ2
PhosPhoSitePlusQ96HQ2
Domaine pattern : Prosite (Expaxy)XTBD (PS51827)   
Domains : Interpro (EBI)XTBD   
Domain families : Pfam (Sanger)XTBD (PF11952)   
Domain families : Pfam (NCBI)pfam11952   
Conserved Domain (NCBI)CDKN2AIPNL
DMDM Disease mutations91368
Blocks (Seattle)CDKN2AIPNL
SuperfamilyQ96HQ2
Human Protein AtlasENSG00000237190
Peptide AtlasQ96HQ2
HPRD14430
IPIIPI00063181   IPI00887796   
Protein Interaction databases
DIP (DOE-UCLA)Q96HQ2
IntAct (EBI)Q96HQ2
FunCoupENSG00000237190
BioGRIDCDKN2AIPNL
STRING (EMBL)CDKN2AIPNL
ZODIACCDKN2AIPNL
Ontologies - Pathways
QuickGOQ96HQ2
Ontology : AmiGOnucleoplasm  nucleolus  signal transduction  
Ontology : EGO-EBInucleoplasm  nucleolus  signal transduction  
NDEx NetworkCDKN2AIPNL
Atlas of Cancer Signalling NetworkCDKN2AIPNL
Wikipedia pathwaysCDKN2AIPNL
Orthology - Evolution
OrthoDB91368
GeneTree (enSembl)ENSG00000237190
Phylogenetic Trees/Animal Genes : TreeFamCDKN2AIPNL
HOVERGENQ96HQ2
HOGENOMQ96HQ2
Homologs : HomoloGeneCDKN2AIPNL
Homology/Alignments : Family Browser (UCSC)CDKN2AIPNL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCDKN2AIPNL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CDKN2AIPNL
dbVarCDKN2AIPNL
ClinVarCDKN2AIPNL
1000_GenomesCDKN2AIPNL 
Exome Variant ServerCDKN2AIPNL
ExAC (Exome Aggregation Consortium)CDKN2AIPNL (select the gene name)
Genetic variants : HAPMAP91368
Genomic Variants (DGV)CDKN2AIPNL [DGVbeta]
DECIPHERCDKN2AIPNL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCDKN2AIPNL 
Mutations
ICGC Data PortalCDKN2AIPNL 
TCGA Data PortalCDKN2AIPNL 
Broad Tumor PortalCDKN2AIPNL
OASIS PortalCDKN2AIPNL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCDKN2AIPNL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCDKN2AIPNL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CDKN2AIPNL
DgiDB (Drug Gene Interaction Database)CDKN2AIPNL
DoCM (Curated mutations)CDKN2AIPNL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CDKN2AIPNL (select a term)
intoGenCDKN2AIPNL
Cancer3DCDKN2AIPNL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCDKN2AIPNL
Genetic Testing Registry CDKN2AIPNL
NextProtQ96HQ2 [Medical]
TSGene91368
GENETestsCDKN2AIPNL
Target ValidationCDKN2AIPNL
Huge Navigator CDKN2AIPNL [HugePedia]
snp3D : Map Gene to Disease91368
BioCentury BCIQCDKN2AIPNL
ClinGenCDKN2AIPNL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91368
Chemical/Pharm GKB GenePA162382150
Clinical trialCDKN2AIPNL
Miscellaneous
canSAR (ICR)CDKN2AIPNL (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCDKN2AIPNL
EVEXCDKN2AIPNL
GoPubMedCDKN2AIPNL
iHOPCDKN2AIPNL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:43:00 CEST 2017

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