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CDKN2B-AS1 (CDKN2B antisense RNA 1)

Identity

Alias_namesCDKN2B antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)ANRIL
CDKN2BAS
RP11-145E5.4
NCRNA00089
p15AS
CDKN2B-AS
PCAT12
Other alias
HGNC (Hugo) CDKN2B-AS1
LocusID (NCBI) 100048912
Atlas_Id 52600
Location 9p21.3  [Link to chromosome band 9p21]
Location_base_pair Starts at 21994791 and ends at 22121094 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CDKN2A (9p21.3) / CDKN2B-AS1 (9p21.3)ENSG00000147889 () / CDKN2B-AS1 (9p21.3)FOCAD (9p21.3) / CDKN2B-AS1 (9p21.3)
MTAP (9p21.3) / CDKN2B-AS1 (9p21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CDKN2B-AS1   34341
Cards
Entrez_Gene (NCBI)CDKN2B-AS1  100048912  CDKN2B antisense RNA 1
AliasesANRIL; CDKN2B-AS; CDKN2BAS; NCRNA00089; 
PCAT12; p15AS
GeneCards (Weizmann)CDKN2B-AS1
Ensembl hg19 (Hinxton)ENSG00000240498 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000240498 [Gene_View]  chr9:21994791-22121094 [Contig_View]  CDKN2B-AS1 [Vega]
ICGC DataPortalENSG00000240498
TCGA cBioPortalCDKN2B-AS1
AceView (NCBI)CDKN2B-AS1
Genatlas (Paris)CDKN2B-AS1
WikiGenes100048912
SOURCE (Princeton)CDKN2B-AS1
Genetics Home Reference (NIH)CDKN2B-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CDKN2B-AS1  -     chr9:21994791-22121094 +  9p21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CDKN2B-AS1  -     9p21.3   [Description]    (hg19-Feb_2009)
EnsemblCDKN2B-AS1 - 9p21.3 [CytoView hg19]  CDKN2B-AS1 - 9p21.3 [CytoView hg38]
Mapping of homologs : NCBICDKN2B-AS1 [Mapview hg19]  CDKN2B-AS1 [Mapview hg38]
OMIM613149   
Gene and transcription
Genbank (Entrez)AB548314 BC038540 BI860238 CB109081 DB451703
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CDKN2B-AS1
Cluster EST : UnigeneHs.512599 [ NCBI ]
CGAP (NCI)Hs.512599
Alternative Splicing GalleryENSG00000240498
Gene ExpressionCDKN2B-AS1 [ NCBI-GEO ]   CDKN2B-AS1 [ EBI - ARRAY_EXPRESS ]   CDKN2B-AS1 [ SEEK ]   CDKN2B-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CDKN2B-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100048912
GTEX Portal (Tissue expression)CDKN2B-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CDKN2B-AS1
DMDM Disease mutations100048912
Blocks (Seattle)CDKN2B-AS1
Human Protein AtlasENSG00000240498
Protein Interaction databases
FunCoupENSG00000240498
BioGRIDCDKN2B-AS1
STRING (EMBL)CDKN2B-AS1
ZODIACCDKN2B-AS1
Ontologies - Pathways
Huge Navigator CDKN2B-AS1 [HugePedia]
snp3D : Map Gene to Disease100048912
BioCentury BCIQCDKN2B-AS1
ClinGenCDKN2B-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100048912
Chemical/Pharm GKB GenePA164717802
Clinical trialCDKN2B-AS1
Miscellaneous
canSAR (ICR)CDKN2B-AS1 (select the gene name)
Probes
Litterature
PubMed129 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCDKN2B-AS1
EVEXCDKN2B-AS1
GoPubMedCDKN2B-AS1
iHOPCDKN2B-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:49:29 CEST 2017

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