Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CDRT15P2 (CDRT15 pseudogene 2)

Identity

Alias (NCBI)CDRT15L1
HGNC (Hugo) CDRT15P2
HGNC Previous nameCDRT15L1
HGNC Previous nameCMT1A duplicated region transcript 15-like 1
LocusID (NCBI) 644694
Atlas_Id 61664
Location 17p12  [Link to chromosome band 17p12]
Location_base_pair Starts at 15764703 and ends at 15765689 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)CDRT15P2   34074
Cards
Entrez_Gene (NCBI)CDRT15P2    CDRT15 pseudogene 2
AliasesCDRT15L1
GeneCards (Weizmann)CDRT15P2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr17:15764703-15765689 [Contig_View]  CDRT15P2 [Vega]
TCGA cBioPortalCDRT15P2
AceView (NCBI)CDRT15P2
Genatlas (Paris)CDRT15P2
SOURCE (Princeton)CDRT15P2
Genetics Home Reference (NIH)CDRT15P2
Genomic and cartography
GoldenPath hg38 (UCSC)CDRT15P2  -     chr17:15764703-15765689 +  17p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CDRT15P2  -     17p12   [Description]    (hg19-Feb_2009)
GoldenPathCDRT15P2 - 17p12 [CytoView hg19]  CDRT15P2 - 17p12 [CytoView hg38]
Genome Data Viewer NCBICDRT15P2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)CF272591
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)CDRT15P2
Gene ExpressionCDRT15P2 [ NCBI-GEO ]   CDRT15P2 [ EBI - ARRAY_EXPRESS ]   CDRT15P2 [ SEEK ]   CDRT15P2 [ MEM ]
Gene Expression Viewer (FireBrowse)CDRT15P2 [ Firebrowse - Broad ]
GenevisibleExpression of CDRT15P2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)644694
GTEX Portal (Tissue expression)CDRT15P2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CDRT15P2
Protein Interaction databases
BioGRIDCDRT15P2
STRING (EMBL)CDRT15P2
ZODIACCDRT15P2
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCDRT15P2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:45:36 CEST 2021

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