Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CDRT8 (CMT1A duplicated region transcript 8)

Identity

Other alias-
HGNC (Hugo) CDRT8
LocusID (NCBI) 94151
Atlas_Id 61667
Location 17p12  [Link to chromosome band 17p12]
Location_base_pair Starts at 15104985 and ends at 15106187 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CDRT8   14387
Cards
Entrez_Gene (NCBI)CDRT8  94151  CMT1A duplicated region transcript 8
Aliases
GeneCards (Weizmann)CDRT8
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:15104985-15106187 [Contig_View]  CDRT8 [Vega]
TCGA cBioPortalCDRT8
AceView (NCBI)CDRT8
Genatlas (Paris)CDRT8
WikiGenes94151
SOURCE (Princeton)CDRT8
Genetics Home Reference (NIH)CDRT8
Genomic and cartography
GoldenPath hg38 (UCSC)CDRT8  -     chr17:15104985-15106187 -  17p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CDRT8  -     17p12   [Description]    (hg19-Feb_2009)
EnsemblCDRT8 - 17p12 [CytoView hg19]  CDRT8 - 17p12 [CytoView hg38]
Mapping of homologs : NCBICDRT8 [Mapview hg19]  CDRT8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA432141 CR737651
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CDRT8
Cluster EST : UnigeneHs.738881 [ NCBI ]
CGAP (NCI)Hs.738881
Gene ExpressionCDRT8 [ NCBI-GEO ]   CDRT8 [ EBI - ARRAY_EXPRESS ]   CDRT8 [ SEEK ]   CDRT8 [ MEM ]
Gene Expression Viewer (FireBrowse)CDRT8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)94151
GTEX Portal (Tissue expression)CDRT8
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CDRT8
DMDM Disease mutations94151
Blocks (Seattle)CDRT8
Protein Interaction databases
BioGRIDCDRT8
STRING (EMBL)CDRT8
ZODIACCDRT8
Ontologies - Pathways
Huge Navigator CDRT8 [HugePedia]
snp3D : Map Gene to Disease94151
BioCentury BCIQCDRT8
ClinGenCDRT8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD94151
Chemical/Pharm GKB GenePA26344
Clinical trialCDRT8
Miscellaneous
canSAR (ICR)CDRT8 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCDRT8
EVEXCDRT8
GoPubMedCDRT8
iHOPCDRT8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:42:08 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.